Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq22291 104 2e-17 seq225328 96.9 2e-15 seq22292 89.7 3e-13 seq84803 84.2 1e-11 >seq22291 Length=1216 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||| ||| | |||| |||||| || || |||||||| || Sbjct 287 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGA 228 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || |||| ||||| ||||| || |||||||| | || || || || || Sbjct 227 AAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 168 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| || ||| ||||| | || | || | ||||| | ||| | Sbjct 167 AATGCCTTCCTTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 109 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || |||||||| || || || |||||||||||||||||||| Sbjct 108 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 60 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| || || || | ||| || || || ||||||||||| ||| Sbjct 970 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 911 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || ||||| ||||| || || || || || |||||||| || || Sbjct 910 AGGGTGCGTCCATCTTCCAATTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGG 851 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||| ||||| || ||| || |||| || | || | ||| | | ||| || Sbjct 850 ATGCCCTCTTTGTCTTGAAT-TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 792 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || ||||| || || || || ||||| ||||| |||||||| Sbjct 791 TTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 744 >seq225328 Length=614 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 |||| ||| ||||| |||||||| || |||||||| || || |||| | || ||| Sbjct 443 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCCTCC 384 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 | ||||||||| ||||||||||| || || || || ||| | | ||| ||||| Sbjct 383 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGG 324 Query 34301 ATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359 ||| || ||||| | || | || | || | | ||| || || | ||||| ||||| Sbjct 323 ATC-TTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTT 265 Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || || |||||||||||||| Sbjct 264 CCCTGTCAGTGTCTTTACAAAGATCTGCAT 235 >seq22292 Length=1070 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| || || |||||||| || ||||| || || || ||| | || Sbjct 902 AGAACCAAGTGCAACGTGGACTCTTTCTGAATATTGTAATCAGAGAGAGTACGACCATCC 843 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| ||||||||||| || || || || ||| | | ||| ||||| Sbjct 842 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 783 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| || ||||| | || | || | || | | ||| || || | ||||| || Sbjct 782 TGGATC-TTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGT 724 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| || ||||| || || |||||||||||||| Sbjct 723 TTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 691 >seq84803 Length=1104 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34187 TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGC 34246 ||||||||| ||| ||||| ||||||||||| ||||| ||| | || || | || Sbjct 338 TGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGACAGTGTACGTCCATCTTCAAGTTGT 279 Query 34247 TTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT 34306 || || |||||||| |||| ||| ||||| ||| | | |||||| || || ||| Sbjct 278 TTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAAT-TTT 220 Query 34307 TGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGT 34365 |||||| | || | || | || | | || || || | || || ||||| || || Sbjct 219 TGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGT 160 Query 34366 GAGAGTTTTCACAAAGATCTGCATC 34390 || ||||| ||||| || |||||| Sbjct 159 AAGCGTTTTTACAAAAATTTGCATC 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321880030601120