Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq18397 134 1e-26 >seq18397 Length=6272 Score = 134 bits (148), Expect = 1e-26 Identities = 166/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| |||||||| Sbjct 1579 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 1522 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 1521 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAA 1462 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || |||| ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 1461 AGCAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 1402 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | ||||| |||| | | | |||||||| ||||| ||||| Sbjct 1401 TGCCTTTTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 1357 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 665 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 606 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAA 14593 |||||||| || || || ||||| | | ||| |||||| | || | || |||| Sbjct 605 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 546 Query 14594 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14653 || |||||||| ||||||||| ||||||||| ||||| || | | || ||||| | | Sbjct 545 TTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGT 486 Query 14654 TGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCT 14693 | ||| || | | | | | |||||| ||||| |||| Sbjct 485 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480520362044360