Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq18397 140 3e-28 >seq18397 Length=6272 Score = 140 bits (154), Expect = 3e-28 Identities = 167/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| |||||||| Sbjct 1579 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 1522 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||| ||||||||||||| |||||| || || || |||||||||||||| || ||||| Sbjct 1521 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAA 1462 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || |||| ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 1461 AGCAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 1402 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | ||||| |||| | | | |||||||| ||||| ||||| Sbjct 1401 TGCCTTTTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 1357 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 || ||||| ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 665 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 606 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 |||||||| ||||| || ||||| | | ||| || || | || | || |||| Sbjct 605 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 546 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 || |||||||| ||||||||| ||||||||| ||||| || | | || ||||| | | Sbjct 545 TTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGT 486 Query 14322 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCT 14361 | ||| || || | | | | |||||| | ||| |||| Sbjct 485 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477912667271800