Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq22291 132 3e-26 seq22292 116 2e-21 seq225328 98.7 6e-16 seq20505 96.9 2e-15 seq84804 95.1 8e-15 seq128380 89.7 3e-13 seq19754 89.7 3e-13 >seq22291 Length=1216 Score = 132 bits (146), Expect = 3e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || || |||||||| |||||||| ||||| | | || || | Sbjct 274 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGAGTGCGTCCG 215 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||||||||||||| || || |||||||| || || | || |||||||| || Sbjct 214 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 155 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| |||||| ||| ||| || ||| |||| ||| |||| ||| || Sbjct 154 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 95 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375 ||||| |||||||| ||||| || || || ||||| || || Sbjct 94 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGAT 54 Score = 98.7 bits (108), Expect = 6e-16 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| || | || || ||||| || || |||||||| || ||||| ||||| Sbjct 743 ACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 684 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | || || |||||||| || ||| || | |||||| || |||| || Sbjct 683 TAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGG 624 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||||||||| || | | | || ||| || ||| ||| ||||| | || Sbjct 623 AATGCCTTCTTTGTCTTGGATTTTAGC---TTTCACATTTTCAATTGTGTCAGAAGCTTC 567 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | ||| || |||||||| || || ||||| || || |||||||| Sbjct 566 AACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 516 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | |||| || | ||| | || ||||| ||||| || ||||| ||||| Sbjct 971 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 912 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || || || ||||||||||| || ||| || | ||| ||||| || | || Sbjct 911 CAGGGTGCGTCCATCTTCCAATTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGG 852 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 ||||| ||||| || ||| |||||| ||| ||| || || ||||| || Sbjct 851 GATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 792 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| || || || ||||| || || ||||| || ||||| ||||| Sbjct 791 TTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 744 >seq22292 Length=1070 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | || ||||||||||| ||||||||||| |||| || | || ||| Sbjct 671 ACCAAGTGAAGGGTGGACTCTTTTTGGATATTGTAATCGGACAGGGTGCGGCCATCTTCC 612 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 | |||||| ||| ||| || | |||||| || || | || || ||||| || || | Sbjct 611 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 552 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 ||| ||| || ||| ||| |||||| || | ||| |||| |||||| |||||| Sbjct 551 ATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCAACTTCCAAAGTTATTGTTTTT 492 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| || || |||||||| Sbjct 491 CCAGTAAGTGTTTTGACAAATATTTGCAT 463 Score = 109 bits (120), Expect = 3e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||| || |||| || ||||||||||| |||||||||||||||||| || | || || Sbjct 444 CACTAAGTGCAGGGTTGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 385 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 ||||||||||||| ||| || | ||| || ||||| | ||| |||||||| || || Sbjct 384 CAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTG 325 Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339 || ||| || | | || ||||| |||| || ||||| || || || || Sbjct 324 TATTTTAGCTTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 265 Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | ||||| || || |||||||| Sbjct 264 TCCAGTCAATGTTTTGACAAATATTTGCAT 235 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| ||| || | ||||| ||||| || |||||||| || |||||||||||||| Sbjct 918 ACCTCCTCGTAAACGTAGAACCAAGTGCAACGTGGACTCTTTCTGAATATTGTAATCAGA 859 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||| ||||| ||| || || | |||||| || || | ||| Sbjct 858 GAGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 799 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || || ||||| || ||| ||| || ||| ||| ||||| ||||| ||| Sbjct 798 AATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 739 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | || || ||||| || || || || ||||| || || ||||| Sbjct 738 TTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 691 >seq225328 Length=614 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| |||| || |||||||| || |||||||||||||||||| || | || ||| Sbjct 215 ACCAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCC 156 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 |||||||||||| ||| || | ||| || ||||| | ||| ||||| || || || Sbjct 155 AATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGT 96 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || ||| || | | || || || |||| || ||||| || || || ||| Sbjct 95 ATTTTAGCTTTGACATTCTCGATTGTATCAGATGGTTCTACTTCCAGGGTAATAGTCTTT 36 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || | ||||| || || |||||||| Sbjct 35 CCAGTCAATGTTTTGACAAATATTTGCAT 7 >seq20505 Length=7550 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||| | ||||||||| || || ||||| || ||||| |||||||| | || || || Sbjct 4601 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 4542 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTC 33276 | ||| || ||| ||| || |||||||||||||| | || || ||||| || || Sbjct 4541 TAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 4482 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 | | | || |||||| ||| || || || || | || || || || || || Sbjct 4481 GATTTTAGC---TTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCAAGGGTAATGGT 4425 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| |||||||| || || |||||||||||||| Sbjct 4424 TTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 4392 >seq84804 Length=1020 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||||| ||||| || |||||||| || ||||| || || ||||| || || ||| Sbjct 317 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 258 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 || || | || |||| |||||||||| || || | | ||| || || | || Sbjct 257 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 198 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 ||||||||||| || |||| ||| || ||| || ||||| | || || Sbjct 197 ATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACT 138 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | || || ||||| || || || ||||| || ||||||||||| Sbjct 137 TCTAAGGTAATAGTTTTGCCAGTTAGTGTTTTCACAAAAATTTGCAT 91 >seq128380 Length=670 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | ||| | |||| |||||| || || || || || |||||||||||||| Sbjct 305 CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAATCAGAT 246 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | || || || || | ||||||||| ||| || | | |||||| || | ||| Sbjct 245 AGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 186 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || || ||||| || ||| | ||| || ||| ||| || || || | ||| Sbjct 185 ATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 126 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | ||| || || || || || | || ||||||||||||||||| Sbjct 125 TCTAAAGTGATAGTCTTGCCAGTCAATGTCTTTACGAAAATTTGCAT 79 >seq19754 Length=5595 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | ||| | || | ||||| || || ||||| || || ||||||||||| Sbjct 4944 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 4885 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | || || || || | ||||||||| ||| || | | |||||| || | ||| Sbjct 4884 AGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 4825 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || || ||||| || ||| | ||| || ||| ||| || || || | ||| Sbjct 4824 ATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 4765 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| ||| || || || || || || || ||||||||||||||||| Sbjct 4764 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 4718 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||||||| || ||||| || ||||| || || ||||| || |||||||| || | Sbjct 4704 CGCAACACTAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCAGACAATGTGCGCCCA 4645 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || || | ||||||||| || || | | ||| || || | || |||||||| || Sbjct 4644 TCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 4585 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| |||| |||| ||| || || || | || || |||| || Sbjct 4584 TCTTGAATCTTTGCCT---TTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTG 4528 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || ||||| || || | |||||||||||| ||||||||| Sbjct 4527 ATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 4489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 317601474726846