Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq20505 102 6e-17 seq22291 98.7 7e-16 seq22292 89.7 4e-13 seq225328 84.2 2e-11 >seq20505 Length=7550 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 || |||||||| || || || ||| ||| |||| || | |||||| || ||||| Sbjct 4582 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 4523 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 ||||| ||||||||||| | || | |||||| |||||| ||||| ||| || | Sbjct 4522 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 4463 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 | | |||||| | | |||||| || | ||||| |||||||| || | ||||| || Sbjct 4462 TCTATAGTATCAGAGGCCTCCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 4403 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 4402 AAAATTTGCAT 4392 >seq22291 Length=1216 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || || |||||||| || || ||||||||||||||||| |||| ||| |||| Sbjct 499 AATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCT 440 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||| ||||||||| ||||| |||| || || || || | || | ||| ||||| ||| Sbjct 439 TCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCT 380 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 || ||| || || | ||| ||| || | || || || || | || || ||| Sbjct 379 TGGATCTTTGCCTTCACATTTTCAATAGTGTCGGAGGGTTCTACCTCTAAAGTGATGGTT 320 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || | |||||| ||||| || ||||| Sbjct 319 TTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 288 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATC 43968 || ||||| || || || |||||||||||||| || || | | || || | || Sbjct 271 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGAGTG-CGTCCGTC 213 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 |||||||| ||||| || || ||||| ||||| || || |||| | ||||| || || Sbjct 212 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 153 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||| || | ||| |||||| | || || || || | ||||| || Sbjct 152 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 93 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||||| || | || |||||||| || ||||| Sbjct 92 TTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 60 >seq22292 Length=1070 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||| || || ||| ||||||||| ||||| |||||| | || |||| ||| Sbjct 671 ACCAAGTGAAGGGTGGACTCTTTTTGGATATTGTAATCGGACAGGGTGCGGCCATCTTCC 612 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | ||| || || ||||| || | ||||| || || |||| | ||||| |||||| | Sbjct 611 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 552 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | ||| || || | ||||| || || | || |||||||| Sbjct 551 ATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCAACTTCCAAAGTTATTGTTTTT 492 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | || || |||||||||||||| Sbjct 491 CCAGTAAGTGTTTTGACAAATATTTGCAT 463 >seq225328 Length=614 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGTC 43971 ||||| || || || |||||| |||||||| ||||| | || || || |||| || Sbjct 215 ACCAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTG-CGACCATCTTC 157 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 |||||| ||||| ||||| || | || || ||||| | || | || || ||||| Sbjct 156 CAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 97 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||||| |||||| | | | ||||| | || || || || | ||||| || || Sbjct 96 TATTTTAGCTTTGACATTCTCGATTGTATCAGATGGTTCTACTTCCAGGGTAATAGTCTT 37 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || || || |||||||||||||| Sbjct 36 TCCAGTCAATGTTTTGACAAATATTTGCAT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353468653255596