Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq14516 134 7e-27 seq179922 127 1e-24 seq14468 127 1e-24 seq14465 127 1e-24 seq255162 123 1e-23 seq35277 123 1e-23 seq29284 123 1e-23 seq14467 123 1e-23 seq101281 122 5e-23 seq196053 118 6e-22 seq179190 118 6e-22 seq78156 118 6e-22 seq54328 118 6e-22 seq132535 116 2e-21 seq18497 116 2e-21 seq14466 116 2e-21 seq5097 116 2e-21 seq38486 113 2e-20 seq111447 111 8e-20 seq57592 91.5 8e-14 >seq14516 Length=2420 Score = 134 bits (148), Expect = 7e-27 Identities = 85/93 (91%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||||| |||||||| | |||||||||||| |||||||||| ||||||||||||||||| Sbjct 1100 AATTATTAAAAAATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 1041 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 1040 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 1008 >seq179922 Length=1473 Score = 127 bits (140), Expect = 1e-24 Identities = 81/88 (92%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 691 AAAAAAT--AATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 748 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||| |||||||||||||||||||||| Sbjct 749 GCTCTAACCAACTGAGCTAATGGGCCGT 776 >seq14468 Length=1410 Score = 127 bits (140), Expect = 1e-24 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 11439 TTAATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||||||||| || | ||||||||||| |||||||||| |||||||||||||||||| Sbjct 710 TTAATAAAAATATTGATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 651 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||| |||||||||||||||||||||| Sbjct 650 CACGACGCTCTAACCAACTGAGCTAATGGGCCGT 617 >seq14465 Length=10451 Score = 127 bits (140), Expect = 1e-24 Identities = 91/103 (88%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 11429 AAATATAGAATTAAT--AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 |||| || ||||||| |||| || | |||||||||||| |||||||||| ||||||| Sbjct 1323 AAAT-TACAATTAATTCAAAAGATGACATTGGCCCATGAGGGGATCGAACCCGCGACCTT 1381 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||| |||||||||||||||||||| Sbjct 1382 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1424 Score = 125 bits (138), Expect = 4e-24 Identities = 86/97 (89%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||||| |||| || ||||||||||| |||||||||| ||||||||||||||| Sbjct 4450 AATTAATATAAAAAAGAAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 4391 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||| |||||||||||||||||||||| Sbjct 4390 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 4354 Score = 118 bits (130), Expect = 6e-22 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||| |||||| | |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 7828 AATTAAAAATATATATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 7769 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 7768 GACGCTCTAACCAACTGAGCTAATGGGCC 7740 >seq255162 Length=655 Score = 123 bits (136), Expect = 1e-23 Identities = 89/101 (88%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||| ||||| || ||||||| | ||||||||||| |||||||||| ||||||||| Sbjct 414 AAATTTAGAAAGAA-AAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 358 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 357 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 317 >seq35277 Length=2940 Score = 123 bits (136), Expect = 1e-23 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 2365 TAAAAAAGGAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 2424 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 2425 CGCTCTAACCAACTGAGCTAATGGGCC 2451 >seq29284 Length=2427 Score = 123 bits (136), Expect = 1e-23 Identities = 86/97 (89%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 11435 AGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||| ||| |||||| || ||||||||||| |||||||||| |||||||||||||| Sbjct 711 AGAAAAAATTAAAAATATAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 652 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||| ||||||||||||||||||||| Sbjct 651 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 615 >seq14467 Length=2844 Score = 123 bits (136), Expect = 1e-23 Identities = 86/97 (89%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 11435 AGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||| |||||||||| | ||||||||||| |||||||||| |||||||||||||| Sbjct 889 AGAAAAAATAAAAAATATTACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 830 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||| ||||||||||||||||||||| Sbjct 829 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 793 >seq101281 Length=2767 Score = 122 bits (134), Expect = 5e-23 Identities = 80/88 (91%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||| |||| || ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 811 ATAACAAAT-AATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 869 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 870 ACGCTCTAACCAACTGAGCTAATGGGCC 897 >seq196053 Length=576 Score = 118 bits (130), Expect = 6e-22 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||| ||||| || || | || | ||||||||||| |||||||||| ||||||||| Sbjct 370 AAATTTAGAA--AAAAATATATATATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 313 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 312 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 272 >seq179190 Length=3224 Score = 118 bits (130), Expect = 6e-22 Identities = 77/84 (92%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1941 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1882 Query 11515 CTGAGCTAATGGGCC-GTCGACGA 11537 ||||||||||||||| || ||||| Sbjct 1881 CTGAGCTAATGGGCCAGTGGACGA 1858 >seq78156 Length=3827 Score = 118 bits (130), Expect = 6e-22 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 3705 TAAATAATTTGATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 3646 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 3645 CGCTCTAACCAACTGAGCTAATGGGCC 3619 >seq54328 Length=1066 Score = 118 bits (130), Expect = 6e-22 Identities = 77/85 (91%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 332 AAAAATCA---TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 388 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 389 CTCTAACCAACTGAGCTAATGGGCC 413 >seq132535 Length=3452 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 588 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 647 Query 11515 CTGAGCTAATGGGCCG 11530 |||||||||||||||| Sbjct 648 CTGAGCTAATGGGCCG 663 >seq18497 Length=8407 Score = 116 bits (128), Expect = 2e-21 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| |||||| | ||||||||||| |||||||||| ||||||||||||||||||| Sbjct 422 TTATTAAAAATT----TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 477 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 478 ACGACGCTCTAACCAACTGAGCTAATGGGCC 508 >seq14466 Length=4692 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 3337 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 3278 Query 11515 CTGAGCTAATGGGCCG 11530 |||||||||||||||| Sbjct 3277 CTGAGCTAATGGGCCG 3262 >seq5097 Length=17952 Score = 116 bits (128), Expect = 2e-21 Identities = 79/88 (90%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| | | |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 5034 AAAAAATGTATTCTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 4975 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 4974 CGCTCTAACCAACTGAGCTAATGGGCCG 4947 >seq38486 Length=7017 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2112 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2171 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 2172 TGAGCTAATGGGCC 2185 >seq111447 Length=5077 Score = 111 bits (122), Expect = 8e-20 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | |||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct 2506 AAAAATATATATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAACACGACG 2447 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 2446 CTCTAACCAACTGAGCTAATGGGCC 2422 >seq57592 Length=707 Score = 91.5 bits (100), Expect = 8e-14 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||| ||||||| ||||||||||| |||||| ||||||||||| Sbjct 428 GGATCGAACCCGCGACCTTCGTGTTATTAACACGACGCTCTAACCAACCGAGCTAATGGG 369 Query 11528 CCGTCGA 11534 |||| || Sbjct 368 CCGTTGA 362 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260526432058252