Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq3671 120 6e-23 >seq3671 Length=4617 Score = 120 bits (132), Expect = 6e-23 Identities = 349/527 (66%), Gaps = 28/527 (5%) Strand=Plus/Plus Query 4474 AAAAATAATTATGTTATTCACTATAAAAA---TTTGAAACAATGTTTAGATTTA-GGTTT 4529 ||||| || |||||||| || |||| ||| |||| |||||| ||| || ||||| Sbjct 2602 AAAAAAAAATATGTTATACATTATAGAAACCTTTTG---CAATGTG-AGAAATATGGTTT 2657 Query 4530 ---AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATC 4586 ||| | | ||| | || ||| || ||||| ||||| | ||| | ||| Sbjct 2658 GCGAGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAAAAAA 2714 Query 4587 ATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTT 4646 |||||| || ||| || || |||| |||| | || || |||||| | || Sbjct 2715 ATATATTGAATTAAACACTCAATTACGAACTTTAGCAACATCCGACTTTGAAAAAGATTT 2774 Query 4647 TTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA 4706 |||||| | ||||||||| | || ||||||||||| ||||| ||| | |||||| | | Sbjct 2775 TTATAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATAT-CGAAAAAAGAG 2833 Query 4707 -AGATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTATCG-GATTT 4757 | | || | ||| |||| | ||| ||| ||| || || || | | || | Sbjct 2834 TAAACGTAAAATTATTAACACATTGGGAAAATCATGGAAAAATCAAAGGTGTTGAGAGTC 2893 Query 4758 AGTATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTG 4816 || | | || | |||||||| ||| | |||||| ||| || |||| ||| Sbjct 2894 TCATTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAGTCC 2953 Query 4817 AACTTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAG 4876 ||||| ||| ||| | | | | || ||||| || ||| |||| ||||| ||||||| Sbjct 2954 AACTTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAG 3013 Query 4877 ATTTATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAA 4936 | |||| || | || || ||||||||||| || | || ||| ||||| | | | Sbjct 3014 AGATATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTA 3070 Query 4937 ATACCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983 | | |||||| || || ||||| || |||||||| || |||||| Sbjct 3071 CCAACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 3117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97622193482758