Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq50497 210 2e-49 seq22291 105 6e-18 seq84804 102 7e-17 seq22292 100 2e-16 seq84803 98.7 8e-16 seq20505 96.9 3e-15 seq19754 91.5 1e-13 seq128380 84.2 2e-11 seq40423 84.2 2e-11 >seq50497 Length=2916 Score = 210 bits (232), Expect = 2e-49 Identities = 476/705 (68%), Gaps = 23/705 (3%) Strand=Plus/Plus Query 32258 TACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAACGATGCCCTCAAAACGATACCG 32317 ||||| |||||||| ||||||||||| || || | || ||| | ||| ||| Sbjct 766 TACGGCTTTATTCCAATTTGCGGCGGTGATGGCATCAATGATAGTTTAAAAGAGATCGAA 825 Query 32318 GGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGCGCAGACTTTAAGGTTGCCATT 32377 |||||||| | || || || || || || | ||||| | ||||| || || | || Sbjct 826 GGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATC 885 Query 32378 CACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGCGTGTCTGCGTGGAACGAACCC 32437 ||||| || ||||| ||| |||||||||| || || || ||||| | |||||||| ||| Sbjct 886 CACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCC 945 Query 32438 TACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTGGCAAACCCTCACATAAAAATT 32497 || |||||||||||||||||||| ||| | || ||| |||| | | || ||| Sbjct 946 TATAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCACGCCCTGAATTGAAGATT 1005 Query 32498 TTACCATCTATTGGCGGGTGGACGTTGTCGGATCC---CTTTTATTTTATGCACGACGCG 32554 | || |||||||| ||||||||| | | ||||| ||| | ||| | || | | Sbjct 1006 CTTCCCTCTATTGGAGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATC- 1064 Query 32555 GAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTTTACAGGTTTGGAAATTCTTT 32614 || | |||| ||||| | || || || |||||| | | ||||||||||| Sbjct 1065 -TAAGAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTC 1122 Query 32615 GACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGGTGCCAACCCGGCGCTCGGT 32674 || || || || || |||||||||||||| || ||||||||||| ||||| | |||||| Sbjct 1123 GATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGT 1182 Query 32675 AACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTACAAGAATTGCGTTCTATGCTG 32734 | | || || | | || | | |||| | ||||| | ||| ||||| Sbjct 1183 AGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATGAAAGAACTACGTGAGATGCTC 1239 Query 32735 GACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGTTGACTAGCGCAATTAGTGCCGG 32793 || || || ||| | | | || || | ||||| || ||| || |||||||| || Sbjct 1240 GATGAGCTCTCAGCT-AAGAATGGTAAGAAATACGAATTAACTTCTGCTATTAGTGCTGG 1298 Query 32794 CCACGACAAAATTGCTGTGGTGCAATATG--AAGCCGCGCAAAAGTACCTCGATAAAATA 32851 || |||||| || || | |||| ||| || ||||| || | ||| | || Sbjct 1299 ATGGGATAAAATTCAAGTTGTTGACTATGGCAAG--GCTCAAAATTATATGGATCATATT 1356 Query 32852 TTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAACACCGAT----TTGGGCTATCA 32907 || | |||||||||||||| || || || ||||| || ||| |||| | |||| Sbjct 1357 TTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAA---TGATACTCTTGGAC-ATCA 1412 Query 32908 GACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTACAC 32952 || | |||||||| || ||||||||| | ||| ||||| Sbjct 1413 AACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTTACAC 1457 >seq22291 Length=1216 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| ||||| |||||||| ||||| | ||| || | Sbjct 516 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 575 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| ||||| || ||||||||| | || ||||| Sbjct 576 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 635 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| ||||||||| ||||||||||||| || | | || || ||| Sbjct 636 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTATCTGACTACAAC 695 Query 115466 ATTCAAAAAGAGTCTACT 115483 || |||||||| |||||| Sbjct 696 ATCCAAAAAGAATCTACT 713 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||| || ||||| ||||| || ||||| ||||||||||| | ||| || | Sbjct 57 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 116 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 ||| ||| ||| | | |||||| |||||| || || |||||| | || ||| Sbjct 117 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 176 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || ||| | | |||| || || || ||||| ||||| | || | | || || Sbjct 177 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTAC 236 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || ||||||||||| |||||| | || |||| ||| | | || || |||| Sbjct 237 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAA 288 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || || || ||||||||||| || | || || || Sbjct 287 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCCTC 346 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| ||| | | || || ||| || || ||||| || | ||| ||||| Sbjct 347 CGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 406 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || || |||| ||| || |||||| | ||||||| | || | | |||||||| Sbjct 407 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 466 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||||||| || ||||| ||||| | || ||| Sbjct 467 TATTCAAAAGGAATCTACCCTACATTTAGTATTG 500 >seq84804 Length=1020 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| |||||| | ||| ||| | Sbjct 91 ATGCAAATTTTTGTGAAAACACTAACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 150 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || ||| ||| ||| || ||||||||| | || |||||| Sbjct 151 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 210 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| |||| || || || ||| | ||||||| || || | || ||||| Sbjct 211 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 270 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || || || ||||||||| | ||| | || ||| | | |||| |||| Sbjct 271 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 319 >seq22292 Length=1070 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||||||||| || || |||||||| || || | ||| ||| | Sbjct 462 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 521 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| | | || ||| || ||| ||||| ||||| | || ||||| Sbjct 522 CGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 581 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| || || ||| | ||||||| | ||| || ||||||| || Sbjct 582 ACAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCCGATTACAA 641 Query 115465 CATTCAAAAAGAGTCTAC 115482 || ||||||||||| || Sbjct 642 TATCCAAAAAGAGTCCAC 659 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| | || ||||| ||||||||| | ||| || ||| | Sbjct 235 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAA-CCATC 293 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | || ||| ||||| ||||| |||||| ||||| || || Sbjct 294 TGACACAATCGAGAATGTGAAAGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCA 353 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || |||| ||| || || ||||| ||||||| || || | ||||| || Sbjct 354 ACAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAA 413 Query 115465 CATTCAAAAAGAGTCTAC 115482 |||||||||||||| || Sbjct 414 TATTCAAAAAGAGTCAAC 431 >seq84803 Length=1104 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| |||||||| || || ||||| ||||| | ||| ||| | Sbjct 136 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 195 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| ||||||| ||||| || || | ||| || || Sbjct 196 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 255 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||||| || || |||||| | ||||||| || || | || || ||| Sbjct 256 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGTACACTGTCAGACTACAAC 315 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 ||||| || || |||||| ||||| Sbjct 316 ATTCAGAAGGAATCTACTTTACAT 339 >seq20505 Length=7550 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| |||||||||||| | || |||| || Sbjct 4391 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAGGCCTC 4450 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| | | | | |||||| ||||| ||||| ||||| | || || || Sbjct 4451 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 4510 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || |||||| ||||||||| || || | || || || Sbjct 4511 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 4570 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||| || || || | ||| | ||| | || | || ||||| || Sbjct 4571 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAA 4621 >seq19754 Length=5595 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || || || || || || || || || || | ||| ||| | Sbjct 4717 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 4776 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| |||||||| || | ||| ||||| Sbjct 4777 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 4836 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || |||||||| ||| | || || | ||||| Sbjct 4837 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTAC 4894 Query 115463 AACATTCAAAAAGAGTCTACT 115483 |||||||| ||||| |||||| Sbjct 4895 AACATTCAGAAAGAATCTACT 4915 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| |||||| | ||| ||| | Sbjct 5402 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5461 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || || ||| ||| || ||||||||| | || |||||| Sbjct 5462 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 5521 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| |||| || || || ||| | ||||||| || || |||| ||||| Sbjct 5522 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCCGACTATAAT 5581 Query 115466 ATTCAAAAAGAGTC 115479 || || || ||||| Sbjct 5582 ATCCAGAAGGAGTC 5595 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||| ||||| || || || ||||| || || | ||| ||| | Sbjct 4945 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACACTGGAAGTGGAAGCTTC 5004 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || |||||| |||||||| ||| | ||| ||||| Sbjct 5005 TGATACGATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 5064 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||||||||||| ||| || || || | ||||||| || | | || || || Sbjct 5065 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACGCTATCTGACTACAA 5124 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||| || || |||||| | ||| |||| Sbjct 5125 TATTCAGAAGGAATCTACTTTGCATCTGGT 5154 >seq128380 Length=670 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || || || | || || || || || || | ||| ||| | Sbjct 78 AATGCAAATTTTCGTAAAGACATTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTC 137 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| |||||||| || | ||| ||||| Sbjct 138 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 197 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || |||||||| ||| | || || | ||||| Sbjct 198 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTAC 255 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGT 115494 || ||||| || || |||||| | ||| |||| Sbjct 256 AATATTCAGAAGGAATCTACTTTGCATCTGGT 287 >seq40423 Length=5538 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 109048 GGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATA 109107 || || |||||| |||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 1211 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 1270 Query 109108 ATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGT 109167 ||| ||| ||| ||| || || || || ||||| | | | ||||| ||||| Sbjct 1271 ATGAAATGGGTTGCGGGCGATGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAGTGC 1330 Query 109168 CCGTTC 109173 || ||| Sbjct 1331 CCCTTC 1336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423774699559240