Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq18397 165 9e-36 seq30878 141 1e-28 seq190416 138 1e-27 seq262350 134 2e-26 seq248793 134 2e-26 seq196416 132 5e-26 seq190415 132 5e-26 seq102012 132 5e-26 seq51928 132 5e-26 seq220850 129 7e-25 seq37042 82.4 8e-11 >seq18397 Length=6272 Score = 165 bits (182), Expect = 9e-36 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||||||||| || || || || | ||| |||||||| || | |||||||||||||||| Sbjct 1559 TCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCA 1500 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || || || || |||||||| || || || |||||||| || | |||||||| |||| Sbjct 1499 AAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCTCCAAAT 1440 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 | || | || |||| |||||| | ||| ||||| || || |||||||||| ||| ||| Sbjct 1439 GTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTTTTCTTAACACATGGT 1380 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || ||||| || || || |||| | |||| Sbjct 1379 AGAGTTTCAATTGCATTGAATAAGAAATC 1351 Score = 159 bits (176), Expect = 4e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| || Sbjct 672 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 613 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || || ||||| || || ||||| || | || || ||||| || || | ||| Sbjct 612 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 553 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 || | || ||||| || |||||||| || |||||||| || || || | |||||| || Sbjct 552 CACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGAT 493 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570 ||||||||||||| |||||| | | |||||||| Sbjct 492 AAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 457 Score = 123 bits (136), Expect = 3e-23 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649 || |||||||| ||||||||||||||||||| |||||||| ||||| | |||||| ||| Sbjct 302 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATATCT 243 Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709 ||||||| ||||| ||||| || ||||| ||||||| || | | | || || ||| Sbjct 242 GGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCCCTCAACAGGGGTTCAAGT 183 Query 93710 TGTGGGTCAAA 93720 ||||||||||| Sbjct 182 TGTGGGTCAAA 172 >seq30878 Length=1733 Score = 141 bits (156), Expect = 1e-28 Identities = 90/95 (95%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC-GGGAGCG 126323 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 1171 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCTCTGGGAGCG 1230 Query 126324 TGGGTTCGAACCCCACACCTGACA-AATTATTATT 126357 |||||||||||||||||||||||| | || ||||| Sbjct 1231 TGGGTTCGAACCCCACACCTGACAGACTTTTTATT 1265 >seq190416 Length=401 Score = 138 bits (152), Expect = 1e-27 Identities = 85/90 (94%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGG 126319 || ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| Sbjct 221 TAAAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGG 162 Query 126320 AGCGTGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||||||| Sbjct 161 AGCGTGGGTTCGAACCCCACACCTGACAAA 132 >seq262350 Length=1315 Score = 134 bits (148), Expect = 2e-26 Identities = 83/88 (94%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 220 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 279 Query 126324 TGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||||||||||||||||||||||| Sbjct 280 TGGGTTCGAACCCCACACCTGACAAATT 307 >seq248793 Length=1373 Score = 134 bits (148), Expect = 2e-26 Identities = 93/103 (90%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 126254 CTTCTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCC 126313 ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1171 CTTCTATAAATCGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCC 1112 Query 126314 C--TCGGGAGCGTGGGTTCGAACCCCACACCTGACA-AATTAT 126353 | ||||||||||||||||||||||||||||||| |||||| Sbjct 1111 CGAGAGGGAGCGTGGGTTCGAACCCCACACCTGACATAATTAT 1069 >seq196416 Length=679 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 172 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGGGGGAGC 231 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 232 GTGGGTTCGAACCCCACACCTGACAAA 258 >seq190415 Length=422 Score = 132 bits (146), Expect = 5e-26 Identities = 81/85 (95%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| Sbjct 238 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGC 179 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 178 GTGGGTTCGAACCCCACACCTGACA 154 >seq102012 Length=527 Score = 132 bits (146), Expect = 5e-26 Identities = 81/85 (95%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 132 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGCG 73 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 72 TGGGTTCGAACCCCACACCTGACAA 48 >seq51928 Length=4792 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 1283 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 1342 Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||||||||||||| Sbjct 1343 TGGGTTCGAACCCCACACCTGACAAAT 1369 >seq220850 Length=219 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 1 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 60 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 61 TGGGTTCGAACCCCACACCTGACAA 85 >seq37042 Length=1262 Score = 82.4 bits (90), Expect = 8e-11 Identities = 79/98 (81%), Gaps = 4/98 (4%) Strand=Plus/Minus Query 162733 TATaaaaaaaTCAGAATTACCTCTTGTGAGAATCGAACTCACGACAACCGGCGTATAAGA 162792 ||||||||||||| | | |||| |||||| | ||||||||||| | || || ||| Sbjct 332 TATAAAAAAATCACA--TGCCTCCTGTGAGGTTTGAACTCACGACCCCTGGTTTACGAGA 275 Query 162793 CCGATGCTCTAACCACTGAGCTAAAGAGGCT-ACATTA 162829 || ||||||| ||||||||||||||||||| |||||| Sbjct 274 CCAGTGCTCTA-CCACTGAGCTAAAGAGGCTGACATTA 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554753590007480