Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq163314 82.4 6e-11 seq96637 82.4 6e-11 >seq163314 Length=3601 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | || ||| | || |||||||||| || || || |||| ||||| ||||| Sbjct 2939 TGGGTACGTGACCACCGAGTCCACCACAAGTTATCGGAAACTTCGGCGGACCCTCACAAT 2880 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 || || | || |||| |||||||| ||||| ||||||||||||| || |||| | Sbjct 2879 GCTCACCGTGGTTTCTTCTTCTCGCATGTGGGGTGGCTCATGATGAAGAAACACCCTCAT 2820 Query 108586 GTGATCTCGGCCGGTCGAAAAATGGACATGACGGACATAT 108625 || ||| | || ||||| || ||||| || |||| Sbjct 2819 GTTATCAGCGAAGGCAATAAAATTGATATGACCGATATAT 2780 >seq96637 Length=3256 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | || ||| | || |||||||||| || || || |||| ||||| ||||| Sbjct 185 TGGGTACGTGACCACCGAGTCCACCACAAGTTATCGGAAACTTCGGCGGACCCTCACAAT 244 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 || || | || |||| |||||||| ||||| ||||||||||||| || |||| | Sbjct 245 GCTCACCGTGGTTTCTTCTTCTCGCATGTGGGGTGGCTCATGATGAAGAAACACCCTCAT 304 Query 108586 GTGATCTCGGCCGGTCGAAAAATGGACATGACGGACATAT 108625 || ||| | || ||||| || ||||| || |||| Sbjct 305 GTCATCAGCGAAGGCAATAAAATTGATATGACCGATATAT 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380364254861688