Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq50497 138 1e-27 seq19754 114 1e-20 seq225328 98.7 1e-15 seq22292 86.0 7e-12 >seq50497 Length=2916 Score = 138 bits (152), Expect = 1e-27 Identities = 632/990 (64%), Gaps = 33/990 (3%) Strand=Plus/Plus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| || || || |||||||||||||| || | | ||||| || | ||| Sbjct 673 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 732 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || ||| | | || || ||||| || |||||||| || Sbjct 733 CGTATACCTATACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 792 Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913 || || || || || ||| ||||| | | || ||| | | |||| || Sbjct 793 GATGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCC 852 Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973 || | || || ||||| || ||||||||| | | || |||| ||| Sbjct 853 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 912 Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031 |||||| | || ||||| | | |||||||| || ||||| || || || | | Sbjct 913 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTATAAAGGCAACTTTGGCCAATTAA 970 Query 99032 TGGCCATACGTAAACA--CAA-CCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088 || | || ||||| || ||| | | || || || ||| ||| || || |||| Sbjct 971 TGTCACTA---AAACAAGCACGCCCTGAATTGAAGATTCTTCCCTCTATTGGAGGGTGGA 1027 Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148 | ||| ||| || |||| ||||| | || | | ||| | | | || || | | Sbjct 1028 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 1087 Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208 | || || || || | |||||||| ||||| ||||| || ||||| ||||||| Sbjct 1088 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 1147 Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268 | ||||| || || || || |||||||| | || | || || || || | || Sbjct 1148 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGTT 1204 Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTGGGTGTG-GCCAATAAA 99327 |||| | | || |||| || ||| |||||| || || | | | || || || Sbjct 1205 ATGTAAGTTTGATGAAAGAACTACGTGAGATGCTCGATGA----GCTCTCAGCTAAGAAT 1260 Query 99328 CGTGTT---TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTC 99384 || |||||| | || ||| | | || || | |||||||| | || || Sbjct 1261 GGTAAGAAATACGAATTAACTTCTGCTATTAGTGCTGGATGGGATAAAATTCAAGTTGTT 1320 Query 99385 GATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACGATT 99439 || ||| || || |||| ||| |||| ||| | || || ||||||||||| | Sbjct 1321 GA-----CTATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACT 1375 Query 99440 TTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCATCG 99498 | || || |||||||| || ||| | || |||||||| |||||||| || || || Sbjct 1376 TCAAGGGAGCCTGGTCAAATGAT-ACTCTTGGACATCAAACGCCATTGTACGCGCCTGCG 1434 Query 99499 TGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAAAA 99558 ||||| || | || | |||||| | || | | || ||| | | | | | | Sbjct 1435 TGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGA 1494 Query 99559 GTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAGTG 99618 ||| | || | ||||||||||| || || || ||||| || | || |||| ||| || Sbjct 1495 GTGAATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTT 1554 Query 99619 CATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCACC 99678 ||||| ||| || | || | || || || || || ||||| || ||||| || Sbjct 1555 CATGATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACT 1614 Query 99679 TGGGAAAACGGTGTTGTTGATTATAGGCAG 99708 ||| || |||| |||||||| || ||| || Sbjct 1615 TGGCAAGACGGAGTTGTTGACTACAGGGAG 1644 >seq19754 Length=5595 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | || | ||||||||||| ||| ||||| || ||||||||||| ||| Sbjct 5172 CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 5113 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||| || || || || | | ||||| || | || Sbjct 5112 AGCGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 5053 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| || ||| ||| | | | | ||| || | |||||| Sbjct 5052 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATCGTATCAGAAGCTTCCACT 4993 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| ||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct 4992 TCCAGTGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 4945 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || | || ||||||||| | ||||| ||| |||||| |||||||| ||||| || Sbjct 4716 CCACCCCGTAGACGCAACACTAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCAGAC 4657 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | |||||| | || ||||| ||||| |||||||| |||| | || || || | || Sbjct 4656 AATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 4597 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||| ||| | | | | || || | |||||| Sbjct 4596 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 4537 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||||| || || | ||||| || ||||||||||| Sbjct 4536 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 4490 >seq225328 Length=614 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| |||||| || |||| ||||| || ||| || || ||||||||||| || Sbjct 461 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 402 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||| ||||| || | || || || || | || Sbjct 401 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 342 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| |||||| || | | | | ||||| | ||| || Sbjct 341 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 282 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| ||||| || ||||| || || |||||||| ||||| Sbjct 281 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 235 >seq22292 Length=1070 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| |||||| | |||| ||||| || ||| || || |||||||| || || Sbjct 917 CCTCCTCGTAAACGTAGAACCAAGTGCAACGTGGACTCTTTCTGAATATTGTAATCAGAG 858 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||| ||||| || | || || || || | || Sbjct 857 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 798 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| |||||| || | | | | ||||| | ||| || Sbjct 797 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 738 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| ||||| || || || || || |||||||| ||||| Sbjct 737 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563099488436040