Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7802 116 5e-21 >seq7802 Length=17912 Score = 116 bits (128), Expect = 5e-21 Identities = 663/1052 (63%), Gaps = 29/1052 (3%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| || || ||||| | ||| | ||| | || || || ||||| ||||| |||||| Sbjct 3662 GAAAGGCCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAGACATTGAT 3603 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724 || | | || || | | |||||| | ||| || | || |||| || || Sbjct 3602 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 3544 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 | ||| ||| | |||||| | || || | ||| ||||||||||| || | || Sbjct 3543 ATTGTTCTCCGCAGCCACACCACGGCCACAGCTTTCCTCCTGTTTCCTTATAGCTATGAA 3484 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 || ||| || | || |||| | ||| | | ||||||| ||| || || | Sbjct 3483 AGACGATAGCATTGAAGGTATTTTTGATACTTTAAAACAATGTGCATTAATTTCTAAATC 3424 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902 |||||||| || || | || | ||| ||||||| || | || || ||| Sbjct 3423 TGCTGGTGGCATAGGTTTACATACACATTGCATCAGAGCT--CAGGGTTCTTACATAGCT 3366 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || ||||| ||| ||||| | | |||||| | | || | |||| || || Sbjct 3365 GGCACTAATGGGGTCTCAAATGGTCTAGTGCCAATGTTGAGAGTGTATAACAATACTGCC 3306 Query 111963 CGCTATGTAAACCAAGCTGGG------CGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 | |||||| | |||| ||| |||| | | || | ||| | ||| | ||| Sbjct 3305 AGATATGTAGATCAAGGTGGAAACAAACGTCCCGGCGCATTT---GCAATTTATTTAGAG 3249 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || ||||| ||||| || | || ||| | || || ||| |||| | || || Sbjct 3248 CCTTGGCATGCGGACATATTTGAATTCTTGGATTTAAAGAAGAACACAGGTAAGGAAGAA 3189 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | | | || || || | ||| | ||||| |||||||| || ||||| ||||| Sbjct 3188 ATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGAGTA 3129 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 || || || |||| |||| | ||||| | | || || ||| | || | Sbjct 3128 GAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATGACTGTCCTGGCCTCGCTGACTGC 3069 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 | || ||||| ||||||| || || || || || || ||||||| || | | Sbjct 3068 TTTGGAGAGGAATTTGAAGAACTATATACCAAATATGAAGAAGAAAAACGATTTA-TAAA 3010 Query 112257 ACG-GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || || |||| || | ||||| | ||| | | | ||| ||||||||||| Sbjct 3009 ACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTAC 2950 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 |||||| ||| | || || || || |||||| ||||||||||||||| ||| | || Sbjct 2949 ACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCAC 2890 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 || || || ||| || || || || | || ||| || ||||||| ||| Sbjct 2889 TATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGC 2830 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 ||||| ||||| || || || || || || || ||| || | || | ||| Sbjct 2829 AGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT------TGAAAATAACAGATT 2776 Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 | ||| | ||||| | | ||| | || || | ||| || |||| |||||| |||||| Sbjct 2775 TAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTAT 2716 Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||| |||||||| || || ||| || | || ||||||||||| | || Sbjct 2715 TGATGTTAATTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAGACATAGACC 2659 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATG 112644 |||||| | ||||| || || | || |||| Sbjct 2658 TATTGGTATTGGTGTTCAGGGCATGGCAGATG 2627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618393456443440