Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq181162 96.9 4e-15 seq181161 93.3 5e-14 >seq181162 Length=1968 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 153900 AGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATC 153959 ||||||||||| ||||| ||||| |||||||| | |||| ||||| ||| || || Sbjct 1806 AGATTAGCACTTCAGACAAGAGAACAGCATATACGTCGAGATAAAGCCACCTCAAATATT 1747 Query 153960 TGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015 ||||| ||||||||||| |||| |||||||| | | || |||||||| ||||| Sbjct 1746 TGCACGGCTCAGGCACTTTTGGCAAATATGTCCGCTATGTACGCAGCATACCATGG 1691 >seq181161 Length=1889 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 153900 AGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATC 153959 ||||||||||| ||||| ||||| |||||||| | |||| ||||| || || || Sbjct 161 AGATTAGCACTTCAGACAAGAGAACAGCATATACGTCGAGATAAAGCCACATCAAATATT 220 Query 153960 TGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015 ||||| ||||||||||| |||| |||||||| | | || |||||||| ||||| Sbjct 221 TGCACGGCTCAGGCACTTTTGGCAAATATGTCCGCTATGTACGCAGCATACCATGG 276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577021008083680