Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq225328 96.9 2e-15 seq22292 96.9 2e-15 seq22291 96.9 2e-15 seq20505 96.9 2e-15 seq19754 89.7 3e-13 seq84803 86.0 4e-12 >seq225328 Length=614 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||| | ||| ||||||||||| || ||||| || || | || |||| Sbjct 446 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCC 387 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||||||| || || || || || || ||||| || ||| | || | ||||| ||||| Sbjct 386 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 327 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||||| ||| || | | || | || || ||||| || | || || ||| Sbjct 326 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTT 267 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| ||||||||||||||| Sbjct 266 TTCCCTGTCAGTGTCTTTACAAAGATCTGCATA 234 >seq22292 Length=1070 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| ||||||||||| || || || || || | || |||| || Sbjct 900 AACCAAGTGCAACGTGGACTCTTTCTGAATATTGTAATCAGAGAGAGTACGACCATCCTC 841 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| || || || || || || ||||| || ||| | || | ||||| ||||| Sbjct 840 CAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTG 781 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| ||| || | | || | || || ||||| || | || || ||||| Sbjct 780 GATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTT 721 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| ||||||||||||||| Sbjct 720 CCCTGTGAGTGTCTTTACAAAGATCTGCATA 690 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||||| || || || || || || ||| | || |||| || Sbjct 672 AACCAAGTGAAGGGTGGACTCTTTTTGGATATTGTAATCGGACAGGGTGCGGCCATCTTC 613 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||| || || || ||||| || || ||||| || ||| | || | || ||||| || Sbjct 612 CAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTG 553 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| ||| || | | || | || | |||||| || | ||||| ||||| Sbjct 552 AATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCAACTTCCAAAGTTATTGTTTT 493 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || || || ||||| || ||||| Sbjct 492 TCCAGTAAGTGTTTTGACAAATATTTGCAT 463 >seq22291 Length=1216 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || |||||| ||||| || ||||| ||||| | ||| | || Sbjct 272 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGAGTGCGTCCGTC 213 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| || || || | ||||| || ||| | || | || |||||||| Sbjct 212 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 153 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || ||| || | | || | || | ||||| || | || ||||| Sbjct 152 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 93 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| ||||| || || ||||||||||||||||| || Sbjct 92 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 57 >seq20505 Length=7550 Score = 96.9 bits (106), Expect = 2e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| || | |||| ||| || |||||||| ||||| || | | ||| |||| || | Sbjct 4599 CAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTA 4540 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 | ||||| || ||||| || | |||||||||||| | || | || ||||| || | Sbjct 4539 GTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGA 4480 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | || ||| || | |||| | ||| |||||| || || | ||| |||||||| | Sbjct 4479 TTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCAAGGGTAATGGTTTTAC 4420 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || ||||| || || || ||||| Sbjct 4419 CCGTAAGGGTCTTGACGAAAATTTGCAT 4392 >seq19754 Length=5595 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| || || || || | ||| |||| || ||||| ||||| ||||| Sbjct 4909 TTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAA 4850 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| |||||| ||| | || | ||||| || || ||| ||| ||| || Sbjct 4849 AATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATT 4790 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | |||||| || | || || || || || || || ||||| || Sbjct 4789 TTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTAC 4730 Query 34970 AAAGATCTGCAT 34981 || || ||||| Sbjct 4729 GAAAATTTGCAT 4718 >seq84803 Length=1104 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| || || | ||| |||| || || |||||||| || || Sbjct 327 TTCCTTCTGAATGTTGTAGTCTGACAGTGTACGTCCATCTTCAAGTTGTTTTCCAGCGAA 268 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | || |||||| | || | ||||||||| || ||| || ||| || Sbjct 267 AATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATT 208 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | |||||| || | || || ||||| || || || || || || Sbjct 207 TTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTAC 148 Query 34970 AAAGATCTGCAT 34981 ||| || ||||| Sbjct 147 AAAAATTTGCAT 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323435869100856