Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq22291 163 4e-35 seq225328 123 4e-23 seq84804 123 4e-23 seq84803 123 4e-23 seq22292 123 4e-23 seq19754 111 2e-19 seq20505 107 3e-18 >seq22291 Length=1216 Score = 163 bits (180), Expect = 4e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || ||||||||||||||| | || || ||| | | Sbjct 517 TGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTG 576 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| |||||| ||| |||||||||||||| || ||||||| Sbjct 577 ACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAAC 636 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || || |||||||| ||| | | || || | || || || | Sbjct 637 AACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTATCTGACTACAACA 696 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| ||| | || |||||| | || |||||||| |||| Sbjct 697 TCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTA 744 Score = 129 bits (142), Expect = 9e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | ||||||||||| || ||| | || ||||||| || Sbjct 289 TGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCCTCCG 348 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || || || ||| ||||| || ||||| || ||||||| Sbjct 349 ACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAAC 408 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||| | || ||| | || ||| | |||||||||| Sbjct 409 AGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATA 468 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || | ||||||||||| || Sbjct 469 TTCAAAAGGAATCTACCCTACATTTAGTATTGCG 502 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | |||||| | || || ||||| |||||| | || || |||| | || Sbjct 61 TGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCG 120 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| ||||| ||| || ||||||||||| || ||||||| Sbjct 121 ATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 180 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || || || ||||| || || | || | | || || |||| Sbjct 181 AACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTACAATA 240 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || || ||||| || Sbjct 241 TTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 274 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| |||| ||||| || ||||| | || || |||| | Sbjct 745 TGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCTG 804 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| |||||| ||| ||||| ||||| || || ||||| | Sbjct 805 ATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGCATCCCTCCTGATCAGC 864 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| ||||| ||||| || ||| | || | | || || || | Sbjct 865 AGCGTCTTATCTTTGCCGGTAAGCAATTGGAAGATGGACGCACCCTGTCTGACTACAACA 924 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||| || || || | ||| ||||| | || | |||| |||| ||||||| Sbjct 925 TCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTATGCAAATATT 982 >seq225328 Length=614 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||||| || ||||| || ||||| | || ||||||| | Sbjct 8 TGCAAATATTTGTCAAAACATTGACTGGAAAGACTATTACCCTGGAAGTAGAACCATCTG 67 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||| ||| ||||||||| ||| || ||||| || || || |||| Sbjct 68 ATACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAAC 127 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| || || ||||| || ||| | | || || | ||||| |||| Sbjct 128 AGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATA 187 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | || || ||| | || | ||||||||| Sbjct 188 TTCAGAAAGAGTCAACCCTGCACTTGGTACTCCGTCTCCGAGGAGGTA 235 >seq84804 Length=1020 Score = 123 bits (136), Expect = 4e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| |||| || ||||| ||||| | || || ||| | | Sbjct 92 TGCAAATTTTTGTGAAAACACTAACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTG 151 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| ||| || || || |||||||||||||| || ||||||| Sbjct 152 ACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAAC 211 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || |||| ||||||| Sbjct 212 AAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATA 271 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || ||| | |||||||| || || ||||||| || Sbjct 272 TCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGG 317 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| ||| | || || ||||| || || | || || ||| | | Sbjct 320 TGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACCTTGGAAGTGGAAGCTTCTG 379 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || |||||| ||| || ||||| ||||| || ||||||| Sbjct 380 ATACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 439 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || |||| ||||||| Sbjct 440 AAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAGACTATAATA 499 Query 146212 TACAAAAAGAATCGACT 146228 | || |||||||| ||| Sbjct 500 TCCAGAAAGAATCTACT 516 >seq84803 Length=1104 Score = 123 bits (136), Expect = 4e-23 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||||| || || ||||| |||||| | || |||||| | | Sbjct 365 TGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCTG 424 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||| || || || ||| || ||||||||||| || ||||||| Sbjct 425 ATACTATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 484 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || |||| ||||||| Sbjct 485 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATA 544 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 545 TCCAGAAAGAATCTAC 560 >seq22292 Length=1070 Score = 123 bits (136), Expect = 4e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||||| || ||||| || ||||| | || ||||||| | Sbjct 236 TGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCTG 295 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| ||| ||||||||| ||| |||||||| || || || |||| Sbjct 296 ACACAATCGAGAATGTGAAAGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAAC 355 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| || || ||||| || ||| | | || || | ||||| |||| Sbjct 356 AGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATA 415 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | |||||||| || || | || ||||| Sbjct 416 TTCAAAAAGAGTCAACCCTGCACTTAGT 443 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||| | || ||||||||||| ||| | || || || | || Sbjct 464 TGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATCCG 523 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||| || ||| ||| ||||| ||||| || ||||||| Sbjct 524 ACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAAC 583 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| ||||| ||| | || ||| | || | | ||||| |||| Sbjct 584 AACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCCGATTACAATA 643 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | |||||||| || || | || || || | || | ||||||||| Sbjct 644 TCCAAAAAGAGTCCACCCTTCACTTGGTTCTCCGTCTCCGAGGAGGTA 691 >seq19754 Length=5595 Score = 111 bits (122), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| ||||| || ||||| || || | || || ||| | | Sbjct 4491 TGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTG 4550 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| ||||| || || ||| || ||||||||||| || ||||||| Sbjct 4551 ATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 4610 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || | || ||||||| Sbjct 4611 AAAGACTGATTTTCGCCGGAAAGCAACTCGAAGATGGGCGCACATTGTCTGACTATAATA 4670 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || || || ||| | || ||||| || || Sbjct 4671 TCCAGAAGGAGTCTACTTTGCACTTAGTGTTGCG 4704 Score = 87.8 bits (96), Expect = 3e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || || ||||| ||||| | || || ||| | | Sbjct 5403 TGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTG 5462 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || || || || |||||||||||||| || ||||||| Sbjct 5463 ACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAAC 5522 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || | || ||||||| Sbjct 5523 AAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCCGACTATAATA 5582 Query 146212 TACAAAAAGAATC 146224 | || || || || Sbjct 5583 TCCAGAAGGAGTC 5595 >seq20505 Length=7550 Score = 107 bits (118), Expect = 3e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| ||||| |||| || || | Sbjct 4393 TGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAGGCCTCTG 4452 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||||||| |||||| ||| ||| ||||| |||||||| || || | Sbjct 4453 ATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGC 4512 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| |||| ||| | || || | || || || | Sbjct 4513 AACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACA 4572 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATA 146263 | ||||| ||||| || | ||| | || | ||| | | |||||||| || Sbjct 4573 TTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTA 4624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783191477552840