Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq50497 244 8e-60 seq22291 150 1e-31 seq84803 149 5e-31 seq22292 147 2e-30 seq84804 143 2e-29 seq19754 141 7e-29 seq128380 138 9e-28 seq20505 132 4e-26 seq225328 122 7e-23 seq40423 105 5e-18 >seq50497 Length=2916 Score = 244 bits (270), Expect = 8e-60 Identities = 635/959 (66%), Gaps = 27/959 (3%) Strand=Plus/Plus Query 45112 GCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGTGCCAGTG 45171 || || ||||| |||||||| || ||| | || || || || | || | || | Sbjct 685 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATA 744 Query 45172 CCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGGCATTAAT 45231 || || ||||| || ||| | ||||| |||||||| || ||||| || |||||||| ||| Sbjct 745 CCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGATGGCATCAAT 804 Query 45232 GACAGTCTTAAAACGATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCGCCGGCCGC 45291 || ||| | ||| ||| ||||||||| |||| | || || || |||||| Sbjct 805 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGT 864 Query 45292 TCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCACAAAAAGGC 45351 || |||||||| || ||||| |||||||| || | ||||||||||||||||| Sbjct 865 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 924 Query 45352 GTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTGTAAAACGG 45411 | ||| | |||||||| || ||||||||||| ||||| ||| | ||| | |||||| Sbjct 925 TTGTCTTCATGGAACGAGCCCTATAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 984 Query 45412 GCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCGATCCGTTT 45471 ||| ||| | || || | | || || ||||| || |||||||| ||||||| || Sbjct 985 GCACGCCCTGAATTGAAGATTCTTCCCTCTATTGGAGGGTGGACGCTTGCCGATCCTTTC 1044 Query 45472 TACCATT---TGCACGATGCGGAGA-AACGCGCTTTGTTTGTGGAATCCGTGCGCGAATT 45527 | | || | || | | ||| ||| || |||||| | || || || || Sbjct 1045 TTCTTTTTAGTTGACAAATCTAAGAGAACACG----ATTTGTGCAGTCAGTAAAGGAGTT 1100 Query 45528 TTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCCCGGCGGCAA 45587 | | || |||||||| || || || || ||||| ||||||||||| || || ||||| Sbjct 1101 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 1160 Query 45588 TGGCGCCAATC----CATCGGTGGGCGATCCAGAACGCGACGGTCTCACTTATGTAGCAC 45643 || || || | | ||||| | |||||| || ||| ||||||| Sbjct 1161 AGGTGCTAACCCTGACCTCGGTAG----CCCAGAA---GATGGTGATTGTTATGTAAGTT 1213 Query 45644 TGCTGCGCGATTTGCGCGACATGCTCGATCAATTGGCGCA-CGAA-ACCGGTCGGCGCTA 45701 || || || | || || ||||||||| | | | || | || | ||| | || Sbjct 1214 TGATGAAAGAACTACGTGAGATGCTCGATGAGCT--CTCAGCTAAGAATGGTAAGAAATA 1271 Query 45702 CGAACTGACTACGGCTATAAGCGCCGGTGACGACAAAATCGCTTTGGTAGATTAT--CAA 45759 |||| | ||| | ||||| || || || || ||||| | || || ||| ||| Sbjct 1272 CGAATTAACTTCTGCTATTAGTGCTGGATGGGATAAAATTCAAGTTGTTGACTATGGCAA 1331 Query 45760 GACGCGCAAACTTATCTCGATCGAATCTTTTTAATGACGTATGATTTTAAAGGCGCTTGG 45819 | || |||| |||| | |||| || || || |||| || || || || || || ||| Sbjct 1332 G--GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGG 1389 Query 45820 TCGAACTCGGATTTGGGCCATCAAACGGCCGTGTACGCGCCAGAATGGAATCGCGACGAG 45879 || || | | || ||||||||| | |||||||||| | ||||||| | | || Sbjct 1390 TCAAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAA 1449 Query 45880 CGTTACACAGTCGACTACGCGGTGCACGTTTTGCTCGAAAAACGGGTAAAGCCTCAAAAA 45939 ||||||| |||| || || | ||||| | | | || || ||| | || Sbjct 1450 ACTTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAG 1509 Query 45940 ATCGTGCTCGGCGTGGCAATGTACGGTCGCGGCTGGACCGGAGTAATTAACTATCAAGAC 45999 || || | || || || ||||| ||||| |||||||| || || | | || ||||| Sbjct 1510 ATTGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCATGATTACGAAGAC 1569 Query 46000 GACAACCCGTTTACCGGCATCGCAACCGGGCCCGTGTCCGGCACTTGGGAAGACGGTGT 46058 ||| || || || |||| ||| || || || || || |||||| ||||||| || Sbjct 1570 AACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGT 1628 >seq22291 Length=1216 Score = 150 bits (166), Expect = 1e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| || ||||| || || ||||| |||||||| |||||||| | | || || | Sbjct 502 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 443 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || |||||||| |||||| | |||| || || ||||| || ||||||||||||||| Sbjct 442 TCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 383 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || ||| |||| | |||||| || ||||||| || | ||| || Sbjct 382 TCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCGGAGGGTTCTACCTCTAAAGTGATG 323 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || | || |||||||| ||||||||| Sbjct 322 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 287 Score = 147 bits (162), Expect = 2e-30 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| ||||| || |||||||||||||| || || || | || ||||| Sbjct 275 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGAGTGCGTCC 216 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | ||| || ||||| | ||||| | ||| ||||| || ||||| || || || Sbjct 215 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 156 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | ||| ||| |||| | ||| || ||| |||| ||||| | ||| | Sbjct 155 GTCTTG-AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAA 97 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | ||||| || || | ||||| ||||| ||||||||||| Sbjct 96 TGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 57 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | |||||| || || || ||||| ||||| || || | Sbjct 970 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 911 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || | ||| || || ||| | || | | |||||||| || || Sbjct 910 AGGGTGCGTCCATCTTCCAATTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGG 851 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||||||||| |||||| | ||| ||| |||| | ||| ||||| |||| || Sbjct 850 ATGCCCTCTTTGTCTTG-AATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 792 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || || || ||||||| |||||||||||| |||||||| Sbjct 791 TTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 744 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || |||||||| || || || ||||| ||||| || || | Sbjct 1198 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCTGAT 1139 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || ||||| ||| | || | | ||| ||||| || ||| Sbjct 1138 AAGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 1079 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||||| ||||| ||| || | || ||| |||| | |||||||| | || || Sbjct 1078 ATACCCTCTTTATCTTG-AATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCCAC 1020 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||||||||| ||||| |||| || || |||||||| ||||| Sbjct 1019 TTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 972 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || ||||| || || || || | || ||||||||||| ||||| || || | Sbjct 742 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 683 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || | ||| ||||| ||| | || | | ||| |||||||| ||| Sbjct 682 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 623 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| ||| ||| |||| | ||||||||| ||| ||| Sbjct 622 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 563 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| ||||| | ||||||||||| || ||||| Sbjct 562 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 516 >seq84803 Length=1104 Score = 149 bits (164), Expect = 5e-31 Identities = 159/205 (78%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATCGAGTTG 29642 ||||| || |||||||| || || ||||| || | ||||| |||| ||| || ||||| Sbjct 566 TGAAGGGTAGATTCTTTCTGGATATTATAGTCTGACAATG-TGCGCCCATCTTCCAGTTG 508 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || || || | |||| |||||| ||||| || ||||| || || |||||||| ||| | Sbjct 507 CTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG-AATCT 449 Query 29703 TTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 ||| || ||| |||| | ||| |||||| ||||||||| | ||| ||||||||||||| Sbjct 448 TTGCCTTAACATTTTCGATAGTATCAGAAGCTTCTACTTCCAAAGTAATAGTTTTGCCAG 389 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| ||||| || ||||| Sbjct 388 TCAATGTTTTCACAAAAATTTGCAT 364 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || ||||| | || ||||| || |||||||| || || | Sbjct 362 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAC 303 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || |||||||| ||||| | || | || || || || || ||| Sbjct 302 AGTGTACGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGA 243 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| || ||||| |||||||| ||| ||| |||| | ||||||||| | || || Sbjct 242 ATCCCCTCCTTATCTTG-AATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAAC 184 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||| |||||||| ||||| | ||||| ||||| || ||||| Sbjct 183 TTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 136 >seq22292 Length=1070 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || |||||||| || || || ||||| ||||| || |||| Sbjct 233 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 174 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || || ||||| ||| | || | | ||| ||||| || ||| Sbjct 173 AAGGTACGTCCATCTTCCAGCTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 114 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||||| ||||| ||| || | || ||| |||| | |||||||| | || || Sbjct 113 ATACCCTCTTTATCTTG-AATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCCAC 55 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||||||||| ||||| |||| || || |||||||| ||||| Sbjct 54 TTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||||| || ||||| || | |||||| ||||| ||||| || ||||| | Sbjct 917 CCTCCTCGTAAACGTAGAACCAAGTGCAACGTGGACTCTTTCTGAATATTGTAATCAGAG 858 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || || || |||||||| | || | | ||| ||||| || ||| Sbjct 857 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 798 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || ||| ||| |||| | |||||| || |||| ||| Sbjct 797 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 738 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || |||||||| || || | || || ||||| |||||||| Sbjct 737 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 691 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| || || || || || ||||||||||| || ||||| | | |||||| Sbjct 450 ACGAAGCACTAAGTGCAGGGTTGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACC 391 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || |||||| | || | | || || || || || || || || || Sbjct 390 ATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTT 331 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || |||| ||| ||| ||| | || | |||||||| |||||||||| || || || Sbjct 330 ATCCTGTATTTTAGCTTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAAT 271 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || ||||| |||||||| ||||| Sbjct 270 GGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 235 >seq84804 Length=1020 Score = 143 bits (158), Expect = 2e-29 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG- 29617 ||| || || | ||||| || ||||| | || || || || || || ||||| || | Sbjct 318 TCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGA 259 Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677 ||||| |||| ||| || ||||| || ||||| | |||| |||||| ||||| || | Sbjct 258 CAATG-TGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAG 200 Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 |||| || |||||||| || ||| |||| ||| ||| |||| | ||||||||| ||| Sbjct 199 GAATGCCTTCTTTGTCCTG-AATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCC 141 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| | || |||||||||||||||| ||||| ||||| || ||||| Sbjct 140 ACTTCTAAGGTAATAGTTTTGCCAGTTAGTGTTTTCACAAAAATTTGCAT 91 >seq19754 Length=5595 Score = 141 bits (156), Expect = 7e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| || || |||| ||| | || ||||| || ||||| || || || | Sbjct 5173 TCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGA 5114 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || || |||||| | || | |||||||||||| || || Sbjct 5113 TAGCGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 5054 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||| || || |||||| | || ||| |||| | || |||||| ||| | Sbjct 5053 AATGCCCTCTTTATCCTG-AATTTTCGCCTTAACATTTTCAATCGTATCAGAAGCTTCCA 4995 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| || || |||||||||||||| | ||||| |||||||| |||||| Sbjct 4994 CTTCCAGTGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 4945 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| || || || | || | || |||||||| |||||||| ||||| | Sbjct 4945 TCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGA 4886 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || || |||||| | || | |||||||||||| || || Sbjct 4885 TAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 4826 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||| || || |||||| | ||| ||| |||| | || |||||| | || | Sbjct 4825 AATTCCCTCTTTATCCTG-AATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 4767 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | ||| ||||| |||||||| | || || || || || |||||| Sbjct 4766 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 4717 Score = 118 bits (130), Expect = 8e-22 Identities = 147/196 (75%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 29593 GATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGC 29651 || || || || || ||||| || | ||||| | || ||| || ||||| || ||||| Sbjct 5595 GACTCCTTCTGGATATTATAGTCGGACAATG-TACGCCCATCTTCCAGTTGCTTTCCAGC 5537 Query 29652 ATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGA 29710 | |||| |||||| ||||| || ||||| || |||||||| || ||| |||| || | Sbjct 5536 GAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTG-AATCTTTGCCTTAA 5478 Query 29711 CAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTT 29770 || |||| | ||||||||| ||| ||||| | || |||||||||||||| | |||| Sbjct 5477 CATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTT 5418 Query 29771 TAACAAATATCTGCAT 29786 | ||||| || ||||| Sbjct 5417 TCACAAAAATTTGCAT 5402 >seq128380 Length=670 Score = 138 bits (152), Expect = 9e-28 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| || || |||| ||| | || ||||| || ||||| || ||||| | Sbjct 306 TCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAATCAGA 247 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || || |||||| | || | |||||||||||| || || Sbjct 246 TAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 187 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||| || || |||||| | ||| ||| |||| | || |||||| | || | Sbjct 186 AATTCCCTCTTTATCCTG-AATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 128 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | ||| ||||| |||||||| || || || || || || |||||| Sbjct 127 CTTCTAAAGTGATAGTCTTGCCAGTCAATGTCTTTACGAAAATTTGCATT 78 Score = 118 bits (130), Expect = 8e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || || || || | || ||||| || ||||| || || || | Sbjct 533 CCACCTCTCAGACGAAGTACTAAGTGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 474 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || || |||||| | || | ||||| || || || ||| Sbjct 473 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 414 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || ||||| |||||| | || ||| |||| | |||||||| | || || Sbjct 413 ATTCCTTCCTTATCTTG-AATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAAC 355 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| || || |||||||||||||| | || || |||||||| |||||| Sbjct 354 TTCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 306 Score = 100 bits (110), Expect = 2e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGT 29714 |||| |||||| ||||| || ||||| || |||||||| || ||| |||| ||| ||| | Sbjct 665 ATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTG-AATCTTTGCTTTAACATT 607 Query 29715 TTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774 ||| | ||||||||| ||| ||||| | || |||||||||||||| | ||||| || Sbjct 606 TTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCAC 547 Query 29775 AAATATCTGCAT 29786 ||| | ||||| Sbjct 546 AAAAACTTGCAT 535 >seq20505 Length=7550 Score = 132 bits (146), Expect = 4e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGA 29630 || ||||| | ||| | |||||||| ||||||||||| || || | |||| || || Sbjct 4606 CGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAAT-GTACGTCC 4548 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | ||||| | |||||| || || |||||||| || || Sbjct 4547 ATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTT 4488 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||| ||| ||| |||||| ||| ||||| || || ||||| || || Sbjct 4487 ATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCAAGGGTAAT 4428 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || | ||| || || || || |||||| Sbjct 4427 GGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 4391 >seq225328 Length=614 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||||| | ||||| || | ||||| ||||| ||||| || || || | Sbjct 461 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 402 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || |||||||| | || | | ||| ||||| || ||| Sbjct 401 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 342 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || ||| ||| |||| | |||||| || |||| ||| Sbjct 341 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 282 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || |||||||| || || | || || ||||| |||||||| Sbjct 281 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 235 >seq40423 Length=5538 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 89727 GCAACTGGCCTTGCGCTTTGAAACAAAAACCTGAGCAGTTGGCGGATGCCGGtttttttt 89786 || |||||||| || | |||| || || |||||| | | || || || || || |||| Sbjct 1509 GCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTTT 1568 Query 89787 ACACGGGCCAAGGCGACAAGACGATTTGTTTCTTTTGCAACGGGGGCCTTAAGGATTGGG 89846 |||| ||||| || ||||| || | || |||| || | || || || ||||| |||| Sbjct 1569 ACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGATGGCGGGCTCAAGGACTGGG 1628 Query 89847 AAGATGGCGATGAACCTTGGGAACAACATGCGCGCTGGTTTGATAATTGCATCTATGTTC 89906 | | | ||| | || ||||| || || ||||||||||| || ||| ||| || | Sbjct 1629 AGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGC 1688 Query 89907 AACTAGTAAAAGGACGCGATTACGTGCAAAATGTTATTTCGAACGCTTGCG 89957 | || || ||||| || || ||||| || || || || || | || |||| Sbjct 1689 AGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAGGCGTGCG 1739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383797939419507