Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq54716 96.9 5e-15 seq126538 95.1 2e-14 seq4485 95.1 2e-14 seq60769 87.8 2e-12 seq226479 86.0 8e-12 seq27599 86.0 8e-12 >seq54716 Length=2922 Score = 96.9 bits (106), Expect = 5e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 8652 CCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTT 8711 || || |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||| Sbjct 1705 CCATAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 1646 Query 8712 CGATTCCCCGACGAGGAG 8729 |||||||||| || |||| Sbjct 1645 CGATTCCCCGCCGGGGAG 1628 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1628 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1687 Query 139413 TACTAACGAGGATTTTGGT 139431 ||||| |||||||| |||| Sbjct 1688 TACTACCGAGGATTATGGT 1706 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 1699 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1640 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 1639 CCCGCCGGGGAG 1628 >seq126538 Length=1487 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 798 TAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 857 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 858 TTCCCCGCCGGGGAG 872 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 801 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 860 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 861 CCCGCCGGGGAGG 873 Score = 89.7 bits (98), Expect = 7e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 872 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 813 Query 139413 TACTAACGAGGATT 139426 ||||| |||||||| Sbjct 812 TACTACCGAGGATT 799 >seq4485 Length=9496 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 6644 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 6585 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 6584 CCCGCCGGGGAG 6573 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 6644 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 6585 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 6584 CCCGCCGGGGAG 6573 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 6573 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 6632 Query 139413 TACTAACGAGGAT 139425 ||||| ||||||| Sbjct 6633 TACTACCGAGGAT 6645 >seq60769 Length=9808 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/70 (89%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 ||||| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||| Sbjct 1893 CAGTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 1952 Query 11786 TTCCCCGACG 11795 ||||||| || Sbjct 1953 TTCCCCGCCG 1962 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1896 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1955 Query 8718 CCCGACG 8724 |||| || Sbjct 1956 CCCGCCG 1962 >seq226479 Length=803 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || || ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 508 TAGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 567 Query 8715 TTCCCCGACG 8724 ||||||| || Sbjct 568 TTCCCCGCCG 577 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 509 AGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 568 Query 11787 TCCCCGACG 11795 |||||| || Sbjct 569 TCCCCGCCG 577 >seq27599 Length=2084 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 529 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 470 Query 8718 CCCGACG 8724 |||| || Sbjct 469 CCCGCCG 463 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 529 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 470 Query 11789 CCCGACG 11795 |||| || Sbjct 469 CCCGCCG 463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 650374378152880