Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq50497 187 2e-42 seq22292 105 6e-18 seq225328 102 8e-17 seq7802 100 3e-16 seq19754 91.5 1e-13 seq22291 82.4 7e-11 >seq50497 Length=2916 Score = 187 bits (206), Expect = 2e-42 Identities = 775/1208 (64%), Gaps = 31/1208 (3%) Strand=Plus/Plus Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853 |||| || ||||| || || |||||||| || || | | || ||||| || | Sbjct 679 GTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATA 738 Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913 || || || || | |||||||||||||||||| | || || |||||||| | ||| Sbjct 739 CCTATACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGATGGC 798 Query 24914 ATCAACGATGCGCTAAAAACTGTGCCGGGCAGCTTCGAGGCGCTGCAACGATCGTGCGCC 24973 ||||| ||| ||||| | ||||| ||| | || || || || || || | Sbjct 799 ATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGC 858 Query 24974 GGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCAG 25033 ||||| | |||||||| || | ||||||||||| ||||| || |||| ||||| || Sbjct 859 GGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAA 918 Query 25034 AAAGGCGTGTCCGCGTGGAACGAGCCGTACAAGGGCAACTTTGGCCAGCTGATGGCGCTG 25093 ||||| |||| | ||||||||||| || || |||||||||||||| | ||| | || Sbjct 919 AAAGGATTGTCTTCATGGAACGAGCCCTATAAAGGCAACTTTGGCCAATTAATGTCACTA 978 Query 25094 AAGCGCGCCTACCCGCACCTCAAAGTGCTGCCCTCGATCGGCGGCTGGACGCTGTCCGAC 25153 || | || ||| | | || | || ||||| || || || |||||||| |||| Sbjct 979 AAACAAGCACGCCCTGAATTGAAGATTCTTCCCTCTATTGGAGGGTGGACGCTTGCCGAT 1038 Query 25154 CCGTTCTTCCACATGCACGACAAGGCGGCGCGCCAGACG-TTTATCGACTCGGTGCAAGA 25212 || |||||| | ||||| | | | | ||| ||| | | || || | || Sbjct 1039 CCTTTCTTCTTTTTAGTTGACAAATCTAAGAG-AACACGATTTGTGCAGTCAGTAAAGGA 1097 Query 25213 GTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTGGGAGTTTCCCGGCGG 25272 || || | || ||||| ||||| || || || || ||||||||||||| || || || Sbjct 1098 GTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGG 1157 Query 25273 CAAGGGCGCCAACCCGGACGTGGGCAACGCCGAGCGCGATCGCGCCACCTACACTACCCT 25332 ||| || || ||||| ||| | || | ||| || ||| | | || | | Sbjct 1158 CAAAGGTGCTAACCCTGACCTCGGTA--GCCCAG-AAGATGGTGATTGTTATGTAAGTTT 1214 Query 25333 GTTGGCGGAGCTGCGCGCGATGCTCGACGCGCTCGGTGCCCACCAAAACCGCCACTACCT 25392 | || || || || | ||||||||| | |||| || | | | ||| Sbjct 1215 GATGAAAGAACTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGTAAGAAATACGA 1274 Query 25393 GCTCACTAGCGCGATTAGCGCGGGCAACGACAAGATCGCCGTCGTCGACTACACTGAGGC 25452 | ||| || ||||| || || || || || || || ||||| |||| Sbjct 1275 ATTAACTTCTGCTATTAGTGCTGGATGGGATAAAATTCAAGTTGTTGACTATGGCAAGGC 1334 Query 25453 GCAAAAGTATCTCGATCTGATATTCCTCATGTCGTACGATTTTAAGGGCGGCTGGTCGCT 25512 ||||| ||| | |||| || ||| | ||| ||||| || ||||| | |||||| Sbjct 1335 TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTC--- 1391 Query 25513 CAACGA---GCTCGGTCATCAGACGGCGCTTTACGCGCCCCCGTGGCGGCCCGACGAACC 25569 || || || || ||||| ||| | | |||||||| ||||| ||| | ||| | Sbjct 1392 AAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAAC 1451 Query 25570 GTACTGCGCGGACCGCGCGGTCGAGGCGCTGCTCGCGCAACACGTG---CCCAAGAACAA 25626 ||| | ||| || || | |||| ||||| ||| || ||| || Sbjct 1452 TTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAG---AA 1508 Query 25627 GATTGTGCTGGGCGTTGCCATGTACGGCCGCGGCTGGACGGGCGT---AGCGAGCGACGA 25683 |||||| | || ||||| ||||| || || |||||||| ||||| | ||| || Sbjct 1509 GATTGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTTCATGATTACGAAGA 1568 Query 25684 CAGCGACAATCCATTCTTGGGCACCGCCACCGGTCCCGTCCCCGGCACCTGGGAGGACGG 25743 || ||| ||| ||| |||| ||| || || || ||| || || ||| | ||||| Sbjct 1569 CA---ACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGG 1625 Query 25744 CGTCGTCGACTATCGACAGATTGC---TCACA-ACCTCACG--CAGTACACGTACGCGTA 25797 || || ||||| | ||||||| | | | |||| | ||| || | || Sbjct 1626 AGTTGTTGACTACAGGGAGATTGCGAATGAAATTGCTCAAGGCAAGTGGGAGTTCCATTA 1685 Query 25798 CGACGACGTTGCCAAGGCGGCGTACATTTATCGCGCATCCGACGG-CAACTTGATTAGCT 25856 |||| | || ||| | || | ||| | | | |||| || | |||| | | || Sbjct 1686 CGACAATGTCGCCCAAGCCCCTTACGTCTTCAGACCATCAACTGGAGATCTTG-TAACCT 1744 Query 25857 ACGACGACGCTGCCTCGGTCACCGCCAAGGCCAAATATGTATTGGACCACGAGCTGGCCG 25916 | || | ||| || || | | |||| ||||||||| | || |||| | | Sbjct 1745 ATGATAATGCTAGATCCGTTATTGAAAAGGGTAAATATGTAAGAAATAACAAGCTAGGTG 1804 Query 25917 GTCTGTTTGCCTGGGAAATTGACGCCGACAACGGTGACCTGCTCAACGCCATGAACAAGG 25976 |||| || || |||||| | ||||| || |||||||| || || || |||||||||| || Sbjct 1805 GTCTCTTCGCTTGGGAAGTGGACGCTGATAACGGTGATCTACTGAATGCCATGAACATGG 1864 Query 25977 GTTTGGGC 25984 || | ||| Sbjct 1865 GTCTCGGC 1872 >seq22292 Length=1070 Score = 105 bits (116), Expect = 6e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| ||||||||||| | || ||| | ||||| ||||||||||| Sbjct 887 GTGGACTCTTTCTGAATATTGTAATCAGAGAGAGTACGACCA-TCCTCCAGCTGCTTGCC 829 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| || || || || || || || || || ||||| |||| || |||| Sbjct 828 AGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATC-TTGGCTT 770 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||| || || || | |||| ||||| || || || | Sbjct 769 TAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTGAGTG 710 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||| Sbjct 709 TCTTTACAAAGATCTGCAT 691 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| |||||||| || ||||||||||| || ||| ||| | || || | Sbjct 440 AAGTGCAGGGTTGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCA-TCTTCCAA 382 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || ||||||| ||||| ||||| || |||||||||||||| || || Sbjct 381 TTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATC-CTGTA 323 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || || | | ||| | ||||| | || || || || | ||| | ||| || | Sbjct 322 TTTTAGCTTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTC 263 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||||| || || || ||||| Sbjct 262 CAGTCAATGTTTTGACAAATATTTGCAT 235 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||||||||| || |||||||||||| || ||| | | | || || || Sbjct 668 AAGTGAAGGGTGGACTCTTTTTGGATATTGTAATCGGACAGGGTGCGGCCA-TCTTCCAG 610 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || | || || || || || || ||||| || |||||||| || ||| Sbjct 609 TTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATC-TTGAA 551 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 || |||| | | | |||| ||||||| ||||| || || | || | ||||| | Sbjct 550 TCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCAACTTCCAAAGTTATTGTTTTTC 491 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || ||||| || || || ||||| Sbjct 490 CAGTAAGTGTTTTGACAAATATTTGCAT 463 >seq225328 Length=614 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| |||||||| || | || | | | ||||| ||||||||||| Sbjct 431 GTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCA-TCCTCCAGCTGCTTGCC 373 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| || || || || || || || || || ||||| |||| || |||| Sbjct 372 AGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATC-TTGGCTT 314 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||| || || || | |||| ||||| || ||||| | Sbjct 313 TAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTCAGTG 254 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||| Sbjct 253 TCTTTACAAAGATCTGCAT 235 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||||||||| ||||||||||| || ||| ||| | || || | Sbjct 212 AAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCA-TCTTCCAA 154 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || ||||||| ||||| ||||| || |||||||| ||||| || || Sbjct 153 TTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATC-CTGTA 95 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | ||| | || || | || || || || | ||| | || || | Sbjct 94 TTTTAGCTTTGACATTCTCGATTGTATCAGATGGTTCTACTTCCAGGGTAATAGTCTTTC 35 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||||| || || || ||||| Sbjct 34 CAGTCAATGTTTTGACAAATATTTGCAT 7 >seq7802 Length=17912 Score = 100 bits (110), Expect = 3e-16 Identities = 432/680 (64%), Gaps = 6/680 (1%) Strand=Plus/Plus Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370 ||||| |||||||| || || ||||||| | ||| || || || | || || ||||| Sbjct 2296 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 2355 Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430 |||| || || || ||||||||||| | ||| ||| || || || | ||| Sbjct 2356 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 2415 Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490 |||||||| || | || || || |||||| || ||||| || || || |||| Sbjct 2416 CAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTT 2475 Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550 || || || || | || | |||||| | || | | || | ||| || || || Sbjct 2476 GCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCT 2535 Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610 || | || || || ||||| || || ||||| ||||| || || ||| Sbjct 2536 TCTAATGCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCA 2595 Query 148611 CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670 |||||||| | || | || | ||||||||| || || | |||||| || || | ||| Sbjct 2596 CTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCA 2655 Query 148671 ATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC---GAGCGGATAGTGGTTGCGG 148727 || || | ||| | || || || | ||| || || ||||| || Sbjct 2656 ATAGGTCTATGTCTCATATT--TGAAGTTTTTGCT-TCAGGGACAGGATAAAAATTAACA 2712 Query 148728 TCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAA 148787 || || | |||| | ||| | || | |||||| ||| | || |||| Sbjct 2713 TCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAA 2772 Query 148788 TCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCC 148847 | | ||| || | | | | ||| | || || || || || |||||||| ||| Sbjct 2773 TTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCC 2832 Query 148848 GTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACG 148907 ||||| | |||| | || | ||| | ||| |||||||| ||||| || | Sbjct 2833 ACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTG 2892 Query 148908 CCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCG 148967 || | || |||||||| ||||| ||||| || || ||||| |||| |||||| ||| Sbjct 2893 CCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTA 2952 Query 148968 CCAGTTTCCACCTGCGTTTC 148987 ||||| ||||| || | ||| Sbjct 2953 CCAGTCTCCACTTGGGCTTC 2972 >seq19754 Length=5595 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| ||||| || || || ||| | || ||||| ||||| || Sbjct 4686 GTAGACTCCTTCTGGATATTATAGTCAGACAATGTGCGCCCATCTTCGAGTTGCTTTCCG 4627 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || | || || || ||||| |||||||||||||| |||||| ||| Sbjct 4626 GCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTT 4567 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || || | | ||||| || | |||| |||||| || || | |||| Sbjct 4566 ACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTT 4507 Query 133644 TTTACGAAAATCTGCATG 133661 |||||||| || |||||| Sbjct 4506 TTTACGAAGATTTGCATG 4489 >seq22291 Length=1216 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| || || || ||||| || || ||| | | | || || | | Sbjct 947 ATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAATT 889 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || || |||||||| || ||||||||||| || ||||| ||| | Sbjct 888 GCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCTTTGTCT-TGAATT 830 Query 133576 TTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | | |||| || || | ||| ||||| || | ||| | ||| || || Sbjct 829 TTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCA 770 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| || ||||||||||| Sbjct 769 GTTAGGGTTTTAACAAAAATCTGCAT 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481591493393480