Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq7802 187 6e-42 seq182296 129 1e-24 >seq7802 Length=17912 Score = 187 bits (206), Expect = 6e-42 Identities = 430/644 (67%), Gaps = 13/644 (2%) Strand=Plus/Minus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 || || || ||| ||| || || || ||| ||||||||||||| |||| || | ||| Sbjct 3506 TCCTGTTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTTGATACTTTAAAA 3447 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634 || ||| | ||||||||| |||| || || ||| || ||| || ||| | | Sbjct 3446 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 3387 Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694 ||||| || | | || || | || || | |||| ||| || || |||| Sbjct 3386 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCAAATGGTCTAGTGCCAA 3332 Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751 |||| ||||| | ||| | ||||| | |||||| |||||||||| || | | | | Sbjct 3331 TGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 3272 Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811 || ||||||| || ||| | || ||||||||| | || |||||||||||||| || | Sbjct 3271 GCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGACATATTTGAATTCTTGGATTTAA 3212 Query 110812 GTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTT 110871 || || ||| |||||| ||||| | || | |||||||| | ||||| Sbjct 3211 AGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATAC 3152 Query 110872 CAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC 110931 ||||| | || |||||| | || || | ||| | ||| ||| |||||||||||| Sbjct 3151 CAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATG 3092 Query 110932 GTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATG 110991 | |||||| || |||| | |||| | || |||||||| || || ||||||| Sbjct 3091 ACTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTATATACCAAATATG 3032 Query 110992 AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTG 111051 || ||||| ||| |||||| | ||||||||| | ||| ||| | | Sbjct 3031 AAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAG 2972 Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111 || | ||||| || ||||| || || || || |||||||| ||| | ||| | || Sbjct 2971 AAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGA 2912 Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 |||||||| ||| | || || ||||| | ||| ||| | ||| Sbjct 2911 GTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 2868 >seq182296 Length=3944 Score = 129 bits (142), Expect = 1e-24 Identities = 355/526 (67%), Gaps = 35/526 (7%) Strand=Plus/Minus Query 304976 AGGCAACGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTT 305035 ||||| ||| | ||||||||||| || | || |||| ||||| |||||||| || ||| Sbjct 3289 AGGCA-CGCTTAAAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTT 3231 Query 305036 GATTTTAGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGG 305094 || ||| ||| |||| |||||||| |||||| || || ||| || || || || |||| Sbjct 3230 GACTTTTCTGCCAGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTAGG 3172 Query 305095 AGTTCCAATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATA 305153 |||||| |||||| ||| ||||||| ||||| ||| | || | || || Sbjct 3171 AGTTCCTCGCTCTATTGCTCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TA 3113 Query 305154 TTAAACATTTG-AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGC 305211 | | | || || |||| |||| || |||||| ||| ||||||||||||| Sbjct 3112 TAGACCGAATGCAGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-- 3057 Query 305212 TGTTATAAAACACAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAA 305269 |||| | | || || | ||| | ||| | ||| | || || ||| | | Sbjct 3056 ---TATATAGTCCGAGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAGCCA 3003 Query 305270 TTCAGTAAAATGCTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACA 305321 | ||| || ||| | ||| |||| |||| | | || |||| ||| Sbjct 3002 T-CAG----AT--TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGACG 2951 Query 305322 ATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATA 305381 | |||| |||| | |||||| | || ||| | |||| |||||| |||||||| ||| | Sbjct 2950 ACGATTTGGTTATTTTCAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACA 2891 Query 305382 AAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATA 305441 || |||||||| | | | |||||||| | ||| | ||| | |||| || | Sbjct 2890 GGGTGAAAGTATTGCCGTGGTCCACATTTCGTATGAATTTGAGTTGCACTTCGCCATACA 2831 Query 305442 ATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 |||| |||||||| || || ||||||||| | |||||||||||||| Sbjct 2830 ATGCTGATTTTGACGGCGACGAAATGAATTTACATGTACCTCAATC 2785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182209521431647