Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq255 129 8e-24 seq36919 100 4e-15 >seq255 Length=1319 Score = 129 bits (142), Expect = 8e-24 Identities = 171/234 (73%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| |||||||| || || ||||| |||| ||| |||| |||| | Sbjct 593 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGGA-----ATC-TCCAGCAAGGCG 540 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| |||||||||||||| || |||||||| |||| || |||| | ||||||| || Sbjct 539 ATGTCCATCATGAACTCGTTCGTGAACGACATTTTCGAGCGTATCGCCGCCGAGGC--GT 482 Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 ||| || || | || ||||||| | ||||||| | | ||| | |||||| ||| Sbjct 481 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCCG 422 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | || | ||| |||||| |||||| |||||||||| ||| ||||||| Sbjct 421 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 368 >seq36919 Length=2187 Score = 100 bits (110), Expect = 4e-15 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| ||| | |||||||| ||||| || |||| ||| || | ||| || Sbjct 1134 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCC 1187 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| || ||||| || ||||||||||| || | || ||||||| ||||||| Sbjct 1188 ATGTCTATAATGAATTCCTTTGTCAACGATATTTTTGAACGCATCGCGGCCGAGGCGTCC 1247 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| || ||||||| | |||||| || | || | |||||| |||| Sbjct 1248 CGCCTGGCGCACTACAACAAGAGGTCAACGATCACATCGAGGGAAGTGCAGACCTCCGTC 1307 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || || | | |||||| || || | ||||| ||| |||||| || Sbjct 1308 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCTGTCAGCGAGGGAAC 1357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7148612624437774