Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq22291 120 3e-22 seq84804 93.3 4e-14 seq19754 89.7 5e-13 seq20505 86.0 6e-12 >seq22291 Length=1216 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | || ||| || ||||||| ||| ||||||||||| || ||||| | Sbjct 514 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 455 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| || || || ||||| |||| || ||| || || | ||| Sbjct 454 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGA 395 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||| ||||| ||||||| ||||| | || | | |||||| | ||| ||| Sbjct 394 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCGGAGGGTTCTACC 335 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | ||||| ||||| || || | ||| || ||||| |||||||||| Sbjct 334 TCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATTC 286 Score = 109 bits (120), Expect = 5e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | ||| ||||| || | ||| || |||||||| ||||| || | Sbjct 288 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAG 229 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || |||| |||| ||||| || || || ||||| || || || || | || Sbjct 228 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 169 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| || |||||||| ||| ||| |||| | | || | | || ||| | ||| Sbjct 168 GAATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 110 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || |||| || || ||||||||||| | ||||||||||| ||||||||| || Sbjct 109 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTG 56 >seq84804 Length=1020 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | || | ||| || ||||| || ||| |||||| || || || || || | Sbjct 319 TTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 260 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || ||| | || ||||| ||||| || || || |||| | || || || | || Sbjct 259 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAG 200 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| || || |||||| |||||| || | | || | | ||||| | ||||| Sbjct 199 GAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCA 140 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || | || || ||||| || || | ||||||||||| || ||||| Sbjct 139 CTTCTAAGGTAATAGTTTTGCCAGTTAGTGTTTTCACAAAAATTTGCAT 91 >seq19754 Length=5595 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || || || |||| ||| || ||| | || ||||| ||||| || || || Sbjct 5593 CTCCTTCTGGATATTATAGTCGGACAATGTACGCCCATCTTCCAGTTGCTTTCCAGCGAA 5534 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| | || || || | ||||| || || |||||| |||||| ||| | | | Sbjct 5533 AATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTAACATT 5474 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | |||||| || | || || ||||| || |||| |||||||| Sbjct 5473 TTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCAC 5414 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 5413 AAAAATTTGCAT 5402 >seq20505 Length=7550 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| || | ||| || || | || || || || ||||| ||||| Sbjct 4582 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 4523 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 ||||| || |||||||| | |||| | ||||| || ||| ||| || || | | | Sbjct 4522 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGAT-TTTAGCTTTTACATT 4464 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || | |||||||| | || || ||||||||||| | || || || Sbjct 4463 TTCTATAGTATCAGAGGCCTCCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGAC 4404 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 4403 GAAAATTTGCATTGTG 4388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449087757573160