Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7802 131 2e-25 >seq7802 Length=17912 Score = 131 bits (144), Expect = 2e-25 Identities = 360/548 (66%), Gaps = 14/548 (3%) Strand=Plus/Minus Query 104711 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 104770 ||| | ||||| |||||||| || ||||| ||||| || || || |||| |||| Sbjct 3164 GCTTTATGGATACCAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTC 3105 Query 104771 TTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTT 104830 | ||||| | | ||||| ||| | || | | || ||||| ||||||| || Sbjct 3104 ATGTGTCCTCATGACTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTA 3045 Query 104831 TACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG-GTGCCAGCTGCCGATGTGTG 104889 || || || || || |||||| || | | || || |||| || | || Sbjct 3044 TATACCAAATATGAAGAAGAAAAACGATTTA-TAAAACAAGTCAGAGCTCAAGAGTTATG 2986 Query 104890 GAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGC 104949 ||| | ||| | | | ||| ||||||||||||||||||||| | || || || || Sbjct 2985 GAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGC 2926 Query 104950 CTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTAC 105009 |||||| ||||||||||||||| ||| | || || || || |||||| || || Sbjct 2925 TTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCAC 2866 Query 105010 AGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGC 105069 || | || ||| || ||||||| ||| ||||| ||||| || || || || Sbjct 2865 TGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGC 2806 Query 105070 TCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGT 105129 || || || ||| || | || | |||| ||| | ||||| | | ||| | Sbjct 2805 ACTTAACATGTTTGT------TGAAAATAACAGATTTAATTTTAAAAAATTAAAAGAAAT 2752 Query 105130 TACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT--- 105186 || || | ||| || |||| |||||| |||||||||| |||||||| || || Sbjct 2751 CACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTCCC 2692 Query 105187 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCT 105246 ||| || | || ||||||||||| | || |||||| | ||||||||||| | Sbjct 2691 TGA---AGCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGCAT 2635 Query 105247 CGCGGATG 105254 || |||| Sbjct 2634 GGCAGATG 2627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581053690097480