Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq41992 87.8 1e-12 >seq41992 Length=4687 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 101745 CTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATG 101804 ||| || ||| | |||||||||||| || || |||| ||| ||||| ||||| || | Sbjct 4499 CTAAATCAGTTATATGAGCAATCATATGTGTCAATAGAGCATAACTAGCTATGTTGAAAG 4440 Query 101805 GCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCAC 101864 | | || | |||||||| || |||||| |||| ||| ||||| |||||| | Sbjct 4439 GAATACCAAGACCCATATCTGCGCTTCTTTGGTACATCATACAAGAAAGTTTTCCACTAG 4380 Query 101865 AGACATAAAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAA 101923 | |||| ||| || ||| ||| ||||| || || | ||||||| | ||||| Sbjct 4379 ATACATGAAACTGTACTAA-ACAGTGACATGGAGGGAGTGCCATTTTGCTTAAATCTGAG 4321 Query 101924 ACATTCCAAGCACACATTAACATCCTTCTATC 101955 |||||| || || | ||||||||||| || Sbjct 4320 GGATTCCATGCGCATACCAACATCCTTCTGTC 4289 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 102089 CCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCC 102148 ||||| || || ||| ||| || | ||||| | ||| | ||||| || || |||||| Sbjct 3993 CCTTCCTCCCTTTCAGTAAATCCTAAATTATCGAGAAACGTCCTAGAACCGTTTGCATCC 3934 Query 102149 CAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCAC 102208 ||||| || || |||||| |||| |||| |||||||||| || | ||| Sbjct 3933 CAAATATGAACTTTTTTATCTGATAAAACTTTACTGTTAGTAGATCCTGAGAGCATCCAT 3874 Query 102209 AACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCA 102268 || || ||||| | || |||| | |||||||| ||| |||||||| | ||| || || Sbjct 3873 AAAAGCTCTTCTATTACGCCTCGCACAAATACTCGCTTTGTAGTTAATAATGGTAAGACA 3814 Query 102269 TT 102270 || Sbjct 3813 TT 3812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360529017081530