Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5945 547 8e-151 seq13889 98.7 1e-15 seq69558 86.0 7e-12 seq67391 86.0 7e-12 seq46256 86.0 7e-12 >seq5945 Length=4136 Score = 547 bits (606), Expect = 8e-151 Identities = 1112/1625 (68%), Gaps = 47/1625 (3%) Strand=Plus/Plus Query 52788 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 52847 |||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| | Sbjct 1277 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 1336 Query 52848 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGG 52907 |||||||||| ||||||| ||| | |||| ||| ||||| || || ||||| Sbjct 1337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 1396 Query 52908 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 52967 ||| | || | || | ||| || || | |||||||||||| || || || ||||| | Sbjct 1397 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 1456 Query 52968 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 53026 | || || ||||| | |||| || ||| ||| ||| ||||| | ||||| || || | Sbjct 1457 TATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACAAAT 1516 Query 53027 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATAGATCCACCATCTACCATAATC 53083 | |||| | |||| |||| ||| | |||| | ||||||||| | ||||| Sbjct 1517 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 1575 Query 53084 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 53143 || || || || |||| ||| || | | || ||| | | || ||||| | Sbjct 1576 AGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 1635 Query 53144 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 53203 || ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||| Sbjct 1636 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 1695 Query 53204 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 53263 || | ||| ||| | || || | |||||| ||||| || |||||||||||||| || | | Sbjct 1696 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 1755 Query 53264 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCC 53321 |||| | ||| | | ||| ||||| || || || ||||| || |||| | || Sbjct 1756 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 1813 Query 53322 AAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTAC 53380 |||| || | || || || ||||| | || || | || Sbjct 1814 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGAC 1873 Query 53381 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 53440 ||| |||||| ||||| ||||| || ||||||| ||||||||| || |||||| Sbjct 1874 TC-CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 1932 Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 ||||| |||||||| ||||| || || | | ||| ||| | ||||| | || || Sbjct 1933 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 1992 Query 53501 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 53559 | | ||| | | | | | |||||| ||||| | || |||||||||||||| ||||| Sbjct 1993 TAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGG 2051 Query 53560 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 53619 |||||||||| |||| || ||| ||||| || | ||||||| |||||| ||| |||| Sbjct 2052 TCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAAC 2111 Query 53620 TTTATTGAGGTTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 53676 ||| || | ||| | ||||| ||||| | || || | ||| ||||| ||| Sbjct 2112 TTTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAA 2168 Query 53677 T-TGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735 | ||| || | ||||||||||| | ||| || || || || || || || || || | Sbjct 2169 TCTGTT-ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTT 2227 Query 53736 CATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTC 53792 ||| | || | | ||||| | | ||||||||||||||| ||||| || || || | Sbjct 2228 CAT---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGC 2284 Query 53793 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTAC 53852 | | ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||| |||| Sbjct 2285 CAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTAC 2344 Query 53853 CAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATT 53912 |||| || | |||| ||||||||||| ||||| | | |||| | | | | || Sbjct 2345 CAGTCTCCACTTGGGCTTCTATAATCGACTTCCATAACTCTTGAGCTCTGACTT--GTTT 2402 Query 53913 TGTATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAAC 53970 | || || ||| |||| || ||| ||||| | | |||||| || ||||| || | Sbjct 2403 TATAAATCGTTTTTCTTCTTCATATTTGGTATATAGTTCTTCAAATTCCTCTCCA-AAGC 2461 Query 53971 ATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC- 54028 | | | | |||||||| |||| |||||||| | ||| || |||||||| Sbjct 2462 AGTCAGCGAGGCCAGGACAGTCATGAGGACACATGAGACTCCAAACT---TCATCCTTTT 2518 Query 54029 --ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTAT 54086 |||| ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| Sbjct 2519 CTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCA 2578 Query 54087 GTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 54146 ||| || || ||||| ||||| || | ||| | ||| | | || || | |||||| | Sbjct 2579 TTTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAG 2638 Query 54147 GTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 54206 | || || || || | | | || || ||||||||||| || ||||||| ||||| | Sbjct 2639 GCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGG 2698 Query 54207 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGG 54266 | || || ||||| |||||||||||||| | | |||||| || | ||||| || || | Sbjct 2699 CAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAG 2758 Query 54267 AGATATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATCCCCCCTGCC 54322 || || || ||| || | || || || || || |||||| || || || Sbjct 2759 CTATGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCA 2814 Query 54323 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCC 54382 |||||| |||||||| ||| ||||||| |||||| | || || || || ||||| || Sbjct 2815 GATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCT 2874 Query 54383 ATCAT 54387 |||| Sbjct 2875 TTCAT 2879 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 54568 CTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627 ||| || ||||| |||| ||| || ||| ||||||||||||| ||||||||||||||||| Sbjct 3406 CTTATTTTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 3465 Query 54628 TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTT 54678 | ||| |||| || |||| ||| | |||| | ||| ||||| | ||| Sbjct 3466 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 3516 >seq13889 Length=23247 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 24385 TTTCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGT 24444 |||| ||| ||| | | |||||| ||||| || | | ||||| || ||||||| | Sbjct 22917 TTTCCTTAGGATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACAT 22858 Query 24445 TTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATAC 24504 |||| || || ||||||||||| ||||| || || || || || | || || ||| Sbjct 22857 TTTCCATAGCAATTTGAAATCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTG 22798 Query 24505 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 24564 | || || || | || || ||||| || || || ||| |||||||| || || || | Sbjct 22797 AGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGA 22738 Query 24565 CATGTTTTATAAAATATTTTTC 24586 |||| || ||||||| ||| || Sbjct 22737 CATGCTTGATAAAATGTTTCTC 22716 >seq69558 Length=3257 Score = 86.0 bits (94), Expect = 7e-12 Identities = 244/370 (66%), Gaps = 9/370 (2%) Strand=Plus/Plus Query 147329 TTATGACTCCA--ATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATT 147386 ||||||||||| |||| || |||||||| ||| | || | || || | | ||| | Sbjct 735 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 792 Query 147387 TAAAAAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGT 147446 ||||||| |||| || |||||| |||| | ||||| || || || | || ||||| Sbjct 793 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATAAAATATGACGGAGAACGGGTTCAAGT 852 Query 147447 TCATAAAAATAATAACGAGTTTGCCTTTTTTAGTAGAAACATGAAACCAGTACTCTCTTA 147506 |||||||| || ||||| | |||| | | | ||||||||| | || | Sbjct 853 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 912 Query 147507 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCG 147565 ||||| | || | ||||| || |||| ||||||||| ||| | | | || | Sbjct 913 CAAAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGACT-TGA 971 Query 147566 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATGTACAGC---TCCCGTTTGGAA 147622 | |||||| ||||| | || | || || | ||| || | ||| | || || || | Sbjct 972 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAGCCATTGCCTTTCGGTA 1031 Query 147623 GTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTTGTGTTTG 147682 |||||||| |||||| | ||||| |||| | || | | || || | | | |||| Sbjct 1032 CATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 1091 Query 147683 ACTGTTTGTA 147692 | || || || Sbjct 1092 ATTGCTTATA 1101 >seq67391 Length=3680 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 54779 ttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCC 54838 || || || ||||| |||| ||| |||| |||||||| || || | |||||||||||| Sbjct 3413 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 3354 Query 54839 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTT 54898 ||||| | ||| || ||| ||||| ||||| || | ||| | || | || | ||| Sbjct 3353 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 3294 Query 54899 GTTACTCCATTATATATTCC 54918 ||||| ||| |||||| || Sbjct 3293 GTTACACCAGAATATATGCC 3274 >seq46256 Length=4484 Score = 86.0 bits (94), Expect = 7e-12 Identities = 244/370 (66%), Gaps = 9/370 (2%) Strand=Plus/Plus Query 147329 TTATGACTCCA--ATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATT 147386 ||||||||||| |||| || |||||||| ||| | || | || || | | ||| | Sbjct 1328 TTATGACTCCAGTATTA--CCAATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1385 Query 147387 TAAAAAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGT 147446 ||||||| |||| || |||||| |||| | ||||| ||||| || | || ||||| Sbjct 1386 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 1445 Query 147447 TCATAAAAATAATAACGAGTTTGCCTTTTTTAGTAGAAACATGAAACCAGTACTCTCTTA 147506 |||||||| || ||||| | |||| | | | ||||| ||| | || | Sbjct 1446 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCA 1505 Query 147507 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCG 147565 ||||| | || | ||||| || |||| ||||||||| ||| | | | || | Sbjct 1506 CAAAGTTAGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGATGACT-TGA 1564 Query 147566 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATGTACAGC---TCCCGTTTGGAA 147622 | |||||| ||||| | || | || || | ||| || | | | | || || || | Sbjct 1565 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 1624 Query 147623 GTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTTGTGTTTG 147682 ||||||||| |||||| | ||||| |||| | || | | || || | | | |||| Sbjct 1625 CTTTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 1684 Query 147683 ACTGTTTGTA 147692 | || || || Sbjct 1685 ATTGCTTATA 1694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592504248074400