Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq66326 203 3e-47 seq20852 192 5e-44 seq22953 107 2e-18 seq20122 96.9 3e-15 seq19342 96.9 3e-15 seq9324 87.8 2e-12 >seq66326 Length=6876 Score = 203 bits (224), Expect = 3e-47 Identities = 358/527 (68%), Gaps = 66/527 (13%) Strand=Plus/Plus Query 29024 CACGCCTCAGTCATCACCCGCTGCACAAAGTCGCGGCCCTTGACGAGCAGCACGTACTCG 29083 |||||||| || |||||| ||| || | || ||||| ||||| ||| ||||||| || Sbjct 5241 CACGCCTCCGTGATCACCTTCTGGACGTACTCTCGGCCTTTGACCAGCTGCACGTAGGCG 5300 Query 29084 CAGCGGTCGTACCAGCGGGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTC 29143 || |||||| ||||||| ||||| |||| ||||||| |||||||| ||||| ||||| Sbjct 5301 CACCGGTCGAACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCGTTCTCCCAGTCCTTG 5360 Query 29144 AGACCGCCGTCGCAGCAAAAGCACCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCG 29203 || |||||||| ||| | |||||| || ||||| |||||||| ||||| |||||||| Sbjct 5361 AGCCCGCCGTCACAGTAGAAGCACTTAGTTTTGTCACCCTGGCCGGTGTAGAAGAATCCC 5420 Query 29204 GCCTCGGCCAACTCTTCGGGCCGCTGTTTCAACCCGCGGGGCCACTCCGCAAAGGTGCGC 29263 || ||||| | || || ||| ||| |||| | ||| ||||| || ||| ||||| Sbjct 5421 GCTTCGGCGAGTTCCTCAGGCTTCTGCTTCATACTGCGAGGCCAGTCGCTGAAGCTGCGC 5480 Query 29264 AAACGCGCGGCTTCCGTGGCATACTGCGGGTGCGCG--GCCGC----------CGACCGC 29311 | || || || || | ||| || ||| |||| || |||| || | || Sbjct 5481 AGGCGGGCCGCCTCGGAGGCGTAGCGCGCGTGCACGGGGCCGGGCATGCGGGGCGCCGGC 5540 Query 29312 GCCGGCGGGG---CGCGG---------TCGT-GTGGC------GTG-------------- 29338 || ||||| | ||||| |||| ||||| ||| Sbjct 5541 GCGGGCGGTGGCGCGCGGACGCCGCACTCGTCGTGGCCAGCGGGTGCGAGCGAGGGCGCG 5600 Query 29339 ---TCGTGCG---CGTTGT-----------TGC----GCACAAACGGACACTGCGGCGCC 29377 ||| ||| ||||| ||| ||| || || ||||| |||||| Sbjct 5601 GGCTCGCGCGGCACGTTGCCAGATTCCGCCTGCCGCCGCAGGAAGGGGCACTGGGGCGCC 5660 Query 29378 CACCGCTTGTGGTCCGTTTCCGGGTCGTCGCCCCTTACCCAATTCGTAATCTCTACCTTG 29437 || |||| ||||||| | | || ||||| ||| ||||| ||| |||| ||||| || Sbjct 5661 CAGCGCTGGTGGTCCTTGGCGGGATCGTCACCCGCAACCCATTTCATAATTTCTACTTTA 5720 Query 29438 CAAAACGCGCAGCGCACCTCGTCGCCGCGGCCCAAGTAGTAGAACCC 29484 |||||||||||||| || || ||||||||||||| || ||||| || Sbjct 5721 CAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGATAATAGAAGCC 5767 >seq20852 Length=11699 Score = 192 bits (212), Expect = 5e-44 Identities = 433/643 (67%), Gaps = 7/643 (1%) Strand=Plus/Minus Query 102323 TTGGACCACGCGCCCTTAAAATCGTAACTCATGAGGAATATTTTATCAAGGAACCTTTGA 102382 || ||||| || ||||| || ||||||||||| | ||| || | ||| | | ||||| Sbjct 2885 TTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGA 2826 Query 102383 GCCGCGTCGTACTTCACCACGGCAATTTTGTCGTAGCCCGAACTAATCGCGCTCGTCAGC 102442 ||| | |||| | || || ||||| || | || | ||||| || || | Sbjct 2825 GCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAAT 2766 Query 102443 TCGTACGTCTTGTTCGTTTGCAGCTGC-AGTTCGTCCAGCATGGCGCGCAACTCTTTCAG 102501 ||||| |||| | || ||||| || || || ||||| | || || ||||||| Sbjct 2765 TCGTATTTCTTAC-CATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCAT 2707 Query 102502 CAAAACAAGGTACGTGTCGGCGTCGCGCTCGCCGTTGCCGAGCGCCGGGTTGGCGCCCTT 102561 |||| | || || | || || | | | ||||| | ||||| || || || Sbjct 2706 CAAACTTACATAACAATCACCATCTT-CTGGGC--TACCGAGGTCAGGGTTAGCACCTTT 2650 Query 102562 GCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAACTTCCACACCTGCAAAAA 102621 ||| || || |||||||||||||| || || || ||||| || ||||| | | || Sbjct 2649 GCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGGAA 2590 Query 102622 CTCTTTAACGGATTCGACAAACACGCGC-CGCTTGTCCGCGTCGTGCATGAAATAGAACG 102680 ||| || || || | ||||| || | | ||| ||| | || |||| | Sbjct 2589 CTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAG 2531 Query 102681 GGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTCAAATGCGGGTTTGCCAGCT 102740 | |||| |||||||| || ||||| || || || || ||||| | ||| || | | Sbjct 2530 GATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGCTTGTT 2471 Query 102741 TGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGCGGATACGCCCT 102800 | | ||| || |||||||||||||||||||||||||||||||||| || | || | Sbjct 2470 TTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTT 2411 Query 102801 TTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGATAGCGACCTTAAAGTCTGCGCGGC 102860 |||| || ||||||| || ||||| || |||||||| | ||| |||||||| | |||| Sbjct 2410 TTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCACGGC 2351 Query 102861 CTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCCGGGAATGGTCTTGAGCGCGTCGTTTA 102920 | | || || ||||| || |||| |||||||| || || | || || | Sbjct 2350 CGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGA 2291 Query 102921 GCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAGCAGATG 102963 ||||| ||||||||||| || || |||||||| |||| ||| Sbjct 2290 TGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATG 2248 >seq22953 Length=36863 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||||||||| || || ||||| ||||||||||||| ||| || || | ||| Sbjct 12646 AGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCC 12705 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| |||||| || ||| | || || | ||| ||||| ||| | ||| |||||||| Sbjct 12706 TCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 12765 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| ||| ||| |||||| |||| || |||||| Sbjct 12766 TGGATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCCACCTCCAAAGTGATGGTC 12825 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | || || || || || ||||| Sbjct 12826 TTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 12857 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | || || | ||| | ||| ||||| ||||| ||||| ||||| | | Sbjct 13543 CCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 13602 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || || ||||||||||| ||| | ||||| | || || || ||| Sbjct 13603 AGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 13662 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || || || || ||||| || || | | | || ||| |||||| | Sbjct 13663 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACT 13722 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || |||||||| |||| || ||||||||||||||||| Sbjct 13723 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 13769 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||||| | |||| || ||||| || ||||| || || || | Sbjct 13313 TTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAG 13372 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | |||| |||| ||||| || ||| |||| || | ||| ||||| || Sbjct 13373 ACAAAGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGG 13432 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| ||||| || || || ||| || | | | || ||| || || Sbjct 13433 GGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTA 13492 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| |||||||||||| || || || |||||||||||||||||||| Sbjct 13493 CTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 13541 >seq20122 Length=23100 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | | ||| | |||||||| || ||||| || || |||||||| | Sbjct 11770 TTCCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTG 11829 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | | || ||||| || || || || |||| ||||| || || || | Sbjct 11830 ACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 11889 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| |||||| || || | ||| |||||| | ||| Sbjct 11890 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCA 11949 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCT 21184 ||||| || || || || || ||||| ||||| || || |||||||| ||||||| Sbjct 11950 CTTCCAATGTGATAGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATGAATCT 12007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | || || | ||| ||||| || ||||| ||||| || ||||| | | Sbjct 11316 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 11375 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || ||||| || || ||| ||||||| || || ||||| || Sbjct 11376 AGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 11435 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || || || || || | | | || ||| |||||| | Sbjct 11436 ATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTGTCAGAGGGCTCAACT 11495 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || || |||||||| || | ||||| ||||||||||||||| Sbjct 11496 TCCAGTGTGATAGTCTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 11543 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || ||||| || | || | || || || || || || |||||||| | | Sbjct 10176 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAC 10235 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || ||||| || || || ||| |||| ||||| || || || || Sbjct 10236 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCAAAAATCAGTCTTTGTTGATCTGGAGGA 10295 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | ||| ||||||| | || | Sbjct 10296 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATAGTATCAGAAGCTTCTACT 10355 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| || ||||| || || ||||| ||||| |||||||| Sbjct 10356 TCCAAAGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 10402 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||||||| || ||||||||||| |||||||| | ||| || | | || || |||||| Sbjct 10656 TGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGT 10715 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| ||| |||| || ||||| ||||| || | ||| || || || || ||| Sbjct 10716 TTGCCAGCAAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTATCCTGAATTTTT 10775 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | |||||| | ||| ||||| || || || || || || Sbjct 10776 GCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTC 10835 Query 21153 AACGTTTTGACAAATATTTGCATT 21176 | || || ||||| ||||||||| Sbjct 10836 AGTGTCTTTACAAAAATTTGCATT 10859 >seq19342 Length=14378 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||||| | |||||| ||||| |||||||||||||| ||||| Sbjct 4036 GTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTC 4095 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | || || | | || || || ||||| || ||| | || | | |||||||| Sbjct 4096 AGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGG 4155 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | |||||||| || ||| || ||| || | | | ||||||| || ||| Sbjct 4156 TGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTC 4215 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 | || | ||||||||| || || || | || ||||| || ||||||||| ||| Sbjct 4216 CACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGA 4271 >seq9324 Length=16806 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788 |||||||| |||||||||||| ||||| | |||| | | ||||||| ||||||||| Sbjct 10995 GGCGGCGTAGGGCTGAACCTGTGCGGCGCGAGCCACCTGCTGCTGCTGGACCCGCACTGG 10936 Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAG 38839 |||||||| | || |||||| || |||||| | ||||| |||| ||| Sbjct 10935 AACCCGCAGCTGGAAGAGCAGGCACAGGACCGCGTGTACCGCGTGGGGCAG 10885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421415055035480