Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq22953 118 1e-21 seq20122 118 1e-21 seq20852 116 4e-21 seq112584 104 2e-17 seq19342 93.3 4e-14 >seq22953 Length=36863 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| ||||| || ||||| || || | || || ||||| | Sbjct 13997 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 13938 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | || | ||||| | ||||||||||||||||| | || ||| Sbjct 13937 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 13878 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || || |||| || | |||||||| ||||||||| Sbjct 13877 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 13818 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| | || || |||||||| |||| Sbjct 13817 ATCCAAAAGGAGTCGACCCTTCATCTAGTACTGCG 13783 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || || || || ||||| || || || | || || || |||| | Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGA-GCCATC 13711 Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||| | |||| || |||| || |||||||| || ||| | || || Sbjct 13710 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 13651 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || ||||||||||| || || | |||||||| |||||||| Sbjct 13650 ACAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 13591 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||| || ||| | || || ||| |||| |||| Sbjct 13590 CATCCAAAAAGAGTCTACTCTTCATTTAGTACTGCG 13555 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || ||||| || || || || ||||| ||||| | || || ||| || | Sbjct 13085 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 13026 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | || | || || | ||||||||||| || ||| | || || Sbjct 13025 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 12966 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||| | ||| ||||| |||||||| || | || || ||| |||||||| Sbjct 12965 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 12906 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||| ||| |||| |||| Sbjct 12905 ATTCAGAAAGAGTCCACTTTGCA 12883 Score = 96.9 bits (106), Expect = 4e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747 |||||||||||| || ||||| || || || ||||| || || | || || | ||||| Sbjct 13314 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTG-AGCCAT 13256 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 | |||| | | ||| | || | || |||| || || || || || || | || | Sbjct 13255 CAGACACCATTGAAAATGTTAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATC 13196 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | ||||| || |||| ||| || || || ||||| || | ||||||||| ||||||| Sbjct 13195 AACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACA 13136 Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892 | |||||||| ||| |||| || || Sbjct 13135 ATATCCAGAAAGAGTCCACCCTTCA 13111 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || ||||| | || || || ||||| ||| | || || ||| | | Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | || || |||||||||||| | ||||| Sbjct 13481 GACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 13422 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | || || ||||| |||| |||| ||||| | || ||||| Sbjct 13421 CAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAAT 13362 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||| ||| | || ||||| ||||| Sbjct 13361 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 13332 >seq20122 Length=23100 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || |||||||| || ||| | || || ||||| | Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | |||| ||| |||| |||||||| ||||| || | || || Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 11195 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| |||| || | ||| || || || ||||| || | |||||| | ||||| || Sbjct 11194 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 11135 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || ||||| |||| ||||| Sbjct 11134 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCG 11100 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||||||||| | || || ||||| ||||| | || || ||||| | Sbjct 11998 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTGGAAGCTTCT 11939 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | ||||| | |||| ||| |||| ||||| || ||||| || | || || Sbjct 11938 GATACAATCGAAAACG-TAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCA 11880 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| || | ||| || || || ||||| || | |||||| || ||||| || Sbjct 11879 ACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCAGACTATAA 11820 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| | || |||| |||||||||| Sbjct 11819 TATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCG 11784 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || ||||| || || || || ||||| ||||| | || || ||||| | Sbjct 10859 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 10800 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| |||||||| || ||||||||||| || | ||||| Sbjct 10799 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCA 10740 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | || || | || ||||||||||| || || | ||||| || ||||| || Sbjct 10739 ACAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 10680 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || || ||||| | || |||| |||| |||| Sbjct 10679 TATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCG 10644 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || ||||| || || || || ||||| ||||| | || || ||||| | Sbjct 11087 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 11028 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | || | ||||||| ||||| || || || || | || || Sbjct 11027 TGATACAATAGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 10968 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| || | ||| || || || ||||| || | ||||| | ||||| || Sbjct 10967 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGTCGCACATTGTCAGACTATAA 10908 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || ||||| |||| ||||| Sbjct 10907 TATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCG 10872 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || || ||||| || ||||| | || || || || | Sbjct 11543 AATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 11484 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| | |||| ||||||| || || || || || || | ||||| Sbjct 11483 TGACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCA 11424 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | || || || ||||| || || | || || || |||||||| Sbjct 11423 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACAA 11364 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || |||||||| | || | ||| |||| | || |||| || || Sbjct 11363 TATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 11316 >seq20852 Length=11699 Score = 116 bits (128), Expect = 4e-21 Identities = 250/374 (67%), Gaps = 0/374 (0%) Strand=Plus/Minus Query 65660 AACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCAGGTGCGGGTGCGCC 65719 || ||||||| || ||||| || || || || || || | || | ||| | || Sbjct 2534 AAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGCT 2475 Query 65720 TTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGCTCCACGCGGTCACG 65779 | || | | ||| | ||||| |||||||| ||||| |||||| |||| | | || Sbjct 2474 TGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAAT 2415 Query 65780 CCCTTTTGCGGCTTCTGCACGGCCGCCCACGGGTCGTGCACCGCCAGCTTGAAGTCGTCG 65839 || ||||| || || || | || ||||| || ||||| | | | || ||||| || Sbjct 2414 CCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCA 2355 Query 65840 CGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGGACTTGAGGCTGTCG 65899 ||||| || || ||||| || || | ||| ||||| |||| || | || || Sbjct 2354 CGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCA 2295 Query 65900 TTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGATGCGTGAGGTTGGGC 65959 ||||||||||| |||||||| || || | |||||||| |||| ||| || || || || Sbjct 2294 TTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGT 2235 Query 65960 ACGGGCACCTTGTCGGCGGGAAAGTCGCGCCCGTACACGCCCCACTCGACGAAGTAGGCG 66019 | || | || |||| || | | || || ||||| || ||||||||||| Sbjct 2234 ATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCA 2175 Query 66020 GCCACCACCTTGCC 66033 |||| || || || Sbjct 2174 CCCACAACTTTTCC 2161 >seq112584 Length=656 Score = 104 bits (114), Expect = 2e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004 || || || || || || || | || || || || ||||||| || |||||| | | Sbjct 281 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 222 Query 117005 TGGATCGCCGGCAGAGA-GGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063 ||||||| | ||| ||| ||| | || || || || | | || || || || || || Sbjct 221 TGGATCGGCAGCA-AGACGGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCGGTTGA 163 Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123 ||| | || || || ||||| || || | ||||||||| | || ||||| || || || Sbjct 162 GGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGAT 103 Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||||| ||||||||||||| || || || || ||||| |||| Sbjct 102 GCCCGGATTGACTTTCAGCAATGAACTTATTTCTAGGGATGAGG 59 >seq19342 Length=14378 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || || ||||| |||||||| ||| |||| || || ||| | Sbjct 4267 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 4208 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | || | ||||| | || || || || || || | ||||| Sbjct 4207 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 4148 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| || || ||||| || || || | || || | |||||||| Sbjct 4147 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 4088 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| || ||||| |||| ||||||| ||| Sbjct 4087 CATTCAAAAGGAATCCACATTGCATCTTGTG 4057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514162807432800