Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq20852 165 7e-36 seq20122 120 3e-22 seq22953 116 3e-21 seq19342 102 7e-17 >seq20852 Length=11699 Score = 165 bits (182), Expect = 7e-36 Identities = 346/510 (68%), Gaps = 12/510 (2%) Strand=Plus/Plus Query 21569 AAAATCGTGGCGGCCTACTTTGTCGAATGGGGAGTGTACCTGAGACAGTTCCCCGTCGAC 21628 ||| | |||| |||||||| || |||||||| || || | || | |||||||| || Sbjct 2164 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 2223 Query 21629 AAGGTGCCGGCGCCGAATCTATCACATATACTATACGGCTTCGTGCCGATATGCGGAGGC 21688 | || || ||||| | ||| | || |||||||| | || || ||||| || Sbjct 2224 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGT 2283 Query 21689 GACGGCATCAACGACGCGCTAAAAACGGTGCCTGGCAGTTTTGAGGCATTGCAACGTTCG 21748 ||||||||||| || ||||| | | |||||||| | ||| | || || || Sbjct 2284 GACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCC 2343 Query 21749 TGTGCGGGTCGGGCCGATTTCAAGGTGGCTATACACGATCCGTGGGCCGCAATACAAAAG 21808 ||| || || | || || || || | || |||||||| ||||| ||| ||||||| Sbjct 2344 TGTAGCGGCCGTGAGGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 2403 Query 21809 CCCCAAAAGGGCGTCTCGTCATGGAACGAACCGTACAAAGGCAACTTTGGTCAACTGATG 21868 || ||||| || | || ||||||||||| || ||||||||||||||||| ||| | ||| Sbjct 2404 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 2463 Query 21869 GCAATGAAGAGGGCCAATCCTCACATTAAAG--TGTTCGCATCGATCGGCGGATGGACTC 21926 || | || ||| ||| | ||| ||| | ||| |||| || || || ||||| | Sbjct 2464 TCACTAAAACAAGCCCGCCCTGA-ATTGAAGATTCTTC-CATCTATTGGTGGGTGGACGC 2521 Query 21927 TGTCCGATCCATT----TTATCATATGCACGACGCCGACGTCAGACGGGTGTTTATCGAT 21982 | ||||||| || || | | || || | | | | ||| ||| | | Sbjct 2522 TTGCCGATCCTTTCTTCTTTTTAGTTG-ACAAATCTAAGAGAACACG---ATTTGTGCAG 2577 Query 21983 TCAGTTGAAGAATTTCTGCTCACGTGGAAGTTCTATGACGGCGTCCACATCGATTGGGAG 22042 ||||| | || || || || || ||||| |||| || || || | |||||||||||| Sbjct 2578 TCAGTAAAGGAGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAG 2637 Query 22043 TTTCCCGGCGGCAAGGGAGCCAACCCCGAC 22072 || || || ||||| || || ||||| ||| Sbjct 2638 TTCCCTGGTGGCAAAGGTGCTAACCCTGAC 2667 >seq20122 Length=23100 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599 ||||| || || ||||||||||| | || | |||| |||| ||| || || ||||||| Sbjct 10434 GTAGATTCCTTCTGAATGTTGTAGT--CTGACAGTGTGCGTCCATCTTCAAGTTGTTTTC 10491 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 ||||| | || || | ||| || || ||||| || |||||||| ||| ||||||| || Sbjct 10492 CAGCGAAAATAAGCCTCTGTTGGTCTGGAGGAATCCCCTCCTTATCTTGAATTTTTGCTT 10551 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 |||| | ||| | ||||| | ||| || || | || | ||||| || || || | Sbjct 10552 TAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGTG 10611 Query 118720 TTTTTACAAAAATCTGCAT 118738 ||||||||||||| ||||| Sbjct 10612 TTTTTACAAAAATTTGCAT 10630 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || ||||| | ||||| || |||||||| || || || || |||||| ||| || Sbjct 10650 ACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCT 10709 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| ||||| | || || | ||| || || ||||| |||||||| || || | Sbjct 10710 AGCTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTATCCTGA 10769 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| ||||| | ||| | || || | ||| || || || | || | ||||| Sbjct 10770 ATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCT-TCCACTTCCAAAGTGATAGTTTT 10828 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || ||||||||||| ||||| Sbjct 10829 CCCAGTCAGTGTCTTTACAAAAATTTGCAT 10858 Score = 102 bits (112), Expect = 7e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599 ||||| ||||| ||||||||||||| | |||||| |||| ||| || ||||| |||| Sbjct 11574 GTAGATTCTTTCTGAATGTTGTAAT--CAGATAGTGTGCGTCCATCTTCTAGCTGCTTTC 11631 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 |||| | || || | |||||||| || || || ||||| || || |||||| || Sbjct 11632 CAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTT 11691 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 |||| | ||| | || || | ||| || || | || | || ||||| ||||| | Sbjct 11692 TAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTG 11751 Query 118720 TTTTTACAAAAATCTGCAT 118738 | ||||| ||||| ||||| Sbjct 11752 TCTTTACGAAAATTTGCAT 11770 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| || || || | |||||||| || || || || || || || ||||| ||| Sbjct 10874 CAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGACCATC 10933 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || || ||||||||| | || || | || ||||| ||||| || || |||||||| Sbjct 10934 TTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 10993 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCACCG 118704 | |||||| |||||| | ||| | || || | ||| || || || | || | | Sbjct 10994 TTGAATTTTAGCTTTAACATTTTCTATTGTATCAGAAGCT-TCCACTTCCAAAGTGATAG 11052 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || ||||| || ||||||||||| ||||| Sbjct 11053 TTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 11086 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || || ||||| ||||| || || || || ||| || ||||| |||||| Sbjct 11346 GTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTACGTCCATCTTCAAGCTGCTTTCCA 11405 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || || | || || || ||||| || || ||||| ||| |||||| ||| Sbjct 11406 GCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTTA 11465 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | ||||| | | ||| || || | || | || ||||| ||||| ||| Sbjct 11466 ACATTTTCAATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTT 11525 Query 118722 TTTACAAAAATCTGCAT 118738 |||||||| || ||||| Sbjct 11526 TTTACAAATATTTGCAT 11542 >seq22953 Length=36863 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| |||||||| ||||| || || || |||||| |||||| | |||||| ||| Sbjct 12661 GTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 12720 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || ||||||||||||| || || || || ||||||||||||||| || || ||| Sbjct 12721 GCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 12780 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||||| ||||| | ||| ||||| | || | || || || || ||||| Sbjct 12781 ACATTTTCGATAGTGTCAGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTC 12840 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 12841 TTAACGAAGATCTGCAT 12857 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| |||||||| | ||||| ||||||||||| || || ||| | |||||| || Sbjct 14241 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAAAGAGTGCGTCCGTC 14300 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | || ||||||||| | || | ||| || ||||| ||||| ||||| |||||||| Sbjct 14301 TTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 14360 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | |||||| ||| || | ||| | || || | || || || | || | || Sbjct 14361 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 14420 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || ||||| ||||| |||||||| Sbjct 14421 TTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 14453 Score = 102 bits (112), Expect = 7e-17 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| ||||| | || |||||||| ||||| |||||||| || |||||| || || Sbjct 13332 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCGTCTTC 13391 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 | ||||||||||| | ||||||||||| || || || || ||||||||||| | ||| Sbjct 13392 CAATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 13451 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 | ||||| ||| || | || | ||||| | || | || || || | ||| | || Sbjct 13452 T-ATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGT-TCTACTTCCAGGGTAATGGTC 13509 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||| ||||| ||||| || ||||| Sbjct 13510 TTTCCAGTCAATGTTTTGACAAATATTTGCAT 13541 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||||||||| |||||||| || || ||||| ||| || |||||||| ||| Sbjct 13573 GTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGTTTGCCA 13632 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||| || ||||| || || || ||||| || ||| ||| || || Sbjct 13633 GCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTT 13692 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | |||||| | ||| || || | || | || ||||| || || || Sbjct 13693 ACATTTTCAATGGTGTCAGATGGCTCCACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTC 13752 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| || ||||| Sbjct 13753 TTGACAAATATTTGCAT 13769 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| ||||| |||||||| || || ||||| ||| || | || || ||| Sbjct 13801 GTCGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCA 13860 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| |||||||||||||| || || |||||||| |||||| ||||| ||| Sbjct 13861 GCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTC 13920 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | ||| | ||||| | ||| || || || | || | ||||| || || || || Sbjct 13921 ACATTTTCAATTGTGTCAGAAGCT-TCAACTTCTAAAGTAATTGTTTTTCCAGTGAGTGT 13979 Query 118721 TTTTACAAAAATCTGCAT 118738 ||| ||||| || ||||| Sbjct 13980 TTTAACAAAGATTTGCAT 13997 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-G 118568 |||| || || | | ||| || || || | ||||| || |||||||| || ||||| | Sbjct 13997 TACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAG 14056 Query 118569 CTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628 | || || || ||| || || ||||||||||| | || || | ||| ||||| || Sbjct 14057 ATAAT-GTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGG 14115 Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 || || ||||| |||||| || ||| || || | ||||| ||||| | || Sbjct 14116 GGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCT 14175 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | || | ||||| || || ||||| || ||||| |||||||| Sbjct 14176 ACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 14225 >seq19342 Length=14378 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| | || | ||| | || | ||| || || |||||||||||||| || Sbjct 4038 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 4097 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || || ||||| ||||| |||| | ||| ||||| || || | Sbjct 4098 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 4157 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| ||| ||||| ||| || | ||| | || || | | ||| | Sbjct 4158 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCA 4217 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | ||||| || || || || || || ||||| ||||| Sbjct 4218 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 4266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432963122868760