Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq20852 273 2e-68 >seq20852 Length=11699 Score = 273 bits (302), Expect = 2e-68 Identities = 746/1131 (66%), Gaps = 31/1131 (3%) Strand=Plus/Minus Query 35873 TTAGCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACG 35932 || ||||||| |||||||| ||||| |||| || ||| || || ||| ||||| Sbjct 3143 TTCGCAATCTCCCTGTAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTA 3084 Query 35933 GCTACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCG 35992 || ||| |||| ||| ||| ||||| | || ||||| |||||||| || || Sbjct 3083 GCGTTGCCTGTGAAGGGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCA 3024 Query 35993 TACATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGCGAGCAAAGCGTCC 36052 ||||| || || || | || | || || |||||||||| ||||| ||||| | Sbjct 3023 TACATAGCAACACCTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTT 2964 Query 36053 ACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTC 36112 || | | || | ||||| | ||| || || |||||||| | |||||| || ||| Sbjct 2963 ACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTT 2904 Query 36113 TGATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATT 36172 ||||| || ||| ||| ||||| ||||| ||||| || |||||||||| |||||| Sbjct 2903 TGATGTCCAAGAGTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATA 2844 Query 36173 TTATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCG 36232 | ||| | ||| | ||| || | |||| | ||| | ||| || || |||||| Sbjct 2843 TGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCG 2784 Query 36233 CTAATCGCTGTGGTGAGTTCTAAAGT---ACGATTCGTTTGTATTTGAACTTGATCGAGC 36289 ||||| || | || | ||| | | || |||| || | || || ||||||| Sbjct 2783 CTAATAGCAGAAGTTAATTCGTATTTCTTACCATTC--TTAGCTGAGAGCTC-ATCGAGC 2727 Query 36290 ATGGCGCGCAATTCGCCCAATAAAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCA 36349 || | || ||||| || ||| | ||| | | || ||| || Sbjct 2726 ATCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCG 2670 Query 36350 ACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAA 36409 | || || || || |||||||| || || || |||||||| ||||| | || ||||| Sbjct 2669 AGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAG 2610 Query 36410 AATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA 36469 ||||||||||| | | || || || || | ||||| ||| |||| | | Sbjct 2609 AATTTCCATGTTAGAAGGAACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTA 2556 Query 36470 ---TCGTGCATATGATAGAAG---GGATCGGACAGTGTCCAACCGCCGATTGATGCCAAC 36523 | || | | ||||| ||||||| || ||||| || || || |||| || Sbjct 2555 GATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGG-AAG 2497 Query 36524 ACTTTTAGATTG-GGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTA 36582 | | || ||| || ||| |||| || ||||||||| ||||| ||||||||||| Sbjct 2496 AATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTA 2437 Query 36583 GGGTTCGTTCCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTG 36642 ||| |||||||||| | ||| ||||||||||||| | || ||||| |||||||| Sbjct 2436 GGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTG 2377 Query 36643 TATGGAAACTTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCC 36702 || || |||||||| | || | ||| || || | || | |||| ||||| || Sbjct 2376 GATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCC 2317 Query 36703 CGTGATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTA 36762 ||| ||||||||| || || || ||||||||||||||||| || ||||| ||||| Sbjct 2316 TTCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTA 2257 Query 36763 TAAAATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAAC 36822 | | || | ||| || || | || | |||||||| || | | || || Sbjct 2256 GAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGAC 2197 Query 36823 GCCCCATTCGACAAAATAGGCCGCTACGGTGTGATCAG-TGTTGTACGTATACGGTTTAT 36881 |||||||| || || ||||| | || | ||| |||| | | | |||| |||| Sbjct 2196 ACCCCATTCTACGAAGTAGGCACCCACAACTTTTCCAGATGTT-TGCTTGAACGGCTTAT 2138 Query 36882 TGTTTTCTTGCCACGTGTATTGTAACGGTTTTAAATGTTTACCATCGGTGTCTGCGATCA 36941 | |||||| | | || |||| || || |||||| | |||||||| || || || Sbjct 2137 TTTTTTCTCCCAATGTATATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGC---CA 2081 Query 36942 CGACTTCTACGGTTTGACTAGCCGAA---CAGCCGTCGGCATTGCACAGTT 36989 |||| | |||| || | ||| ||||||||| ||||||| |||| Sbjct 2080 CGACAATTTCGGTGGGATCACTTGAACTGCAGCCGTCGTCATTGCAAAGTT 2030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417467761937600