Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5945 526 2e-144 seq13889 141 9e-29 seq112584 109 5e-19 >seq5945 Length=4136 Score = 526 bits (582), Expect = 2e-144 Identities = 1183/1759 (67%), Gaps = 25/1759 (1%) Strand=Plus/Plus Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864 |||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| | || Sbjct 1306 ATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTTAAACCCATTTTC 1365 Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924 || ||| ||||| || || |||||| | || |||| ||| | | || ||| | Sbjct 1366 CAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGTTTAGCAACATGTATGTTA 1425 Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984 | ||||||||||| |||||||| || ||||| || |||||||| | || |||| Sbjct 1426 AAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTGCCATCTGTATGGATGTTTTT 1485 Query 36985 TGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTA--AAT 37042 | || |||||||| || ||||| || | | | |||| || | | | || | | ||| Sbjct 1486 AGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTAT-TTCTTTAGGAATTTTTTCAAT 1544 Query 37043 GT--TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATT 37100 | || ||||| ||||| | | | ||| || || || || | || ||||| || Sbjct 1545 TTCTTGTATAGATCCATTGTTGTATATAATAAGGTTTTTCATATCTTCATCCCACAAATC 1604 Query 37101 TCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATAC 37160 | | | || ||| || || | || || || |||| ||||||||||| || Sbjct 1605 AGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAAGAC 1664 Query 37161 TCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATT 37218 ||||||| ||| |||| ||| | ||| | ||||||| || ||| | || | | ||| Sbjct 1665 TCTTCTTTGGTAAATAT-TTGAT-GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATT 1722 Query 37219 TGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTA 37278 || | ||||| ||||| ||||| || ||||| | || ||| | ||| |||||| | Sbjct 1723 TGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTT 1782 Query 37279 TTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATA 37338 || | | ||| || || ||| ||||| | ||||| || | || ||||||| Sbjct 1783 GCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATA 1842 Query 37339 TCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAA 37398 ||||| || || ||||||| || |||||| | | |||||| || | || | Sbjct 1843 TCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCT 1902 Query 37399 ATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGT 37458 ||| ||||| ||| ||||||| ||||| ||| ||||||| |||||||| || |||||| Sbjct 1903 TTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGT 1962 Query 37459 ATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT-AATATAAACACATC 37517 ||| | | | |||||| || || ||| | | ||| | || || | |||| |||| Sbjct 1963 TGATTGAGAAGTATTGCTTTCTCACTTTCGTAAG-ATATTCTCATCAACACAAACGCATC 2021 Query 37518 AGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTC 37577 |||| ||||||||||| ||||| || ||||||||| || |||| || | | ||| Sbjct 2022 TGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTC 2081 Query 37578 TATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGT 37637 || |||||| |||| | ||| || | ||| |||| ||||| | || || || || Sbjct 2082 AGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGT 2141 Query 37638 AATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGAAAT 37697 ||| | | || || | || ||||| |||||| | |||||| | | | | || Sbjct 2142 GATTTCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTAT 2201 Query 37698 AGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACA 37757 || | || || || || || ||||||||||| | | |||| | || ||| || || Sbjct 2202 GGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCA 2261 Query 37758 GAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATC 37817 ||||| || || |||| || || | ||| ||||||| ||| | ||||||| ||| Sbjct 2262 AAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATC 2321 Query 37818 TTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAA 37877 ||||| | || || || || || || | ||| || || ||||| || |||||||| Sbjct 2322 CTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATCGACTTCCATAA 2381 Query 37878 ACTTCTTG--CTTTAACGATCGCTTTA---Att-tttttCTTTGTTTCGTATTCTATATA 37931 ||||| || | || | | |||| || |||||||| ||| |||| |||| Sbjct 2382 C--TCTTGAGCTCTGAC--TTGTTTTATAAATCGTTTTTCTTC--TTCATATTTGGTATA 2435 Query 37932 TAATTTGTTAAAATCATTCCCCCATACA-TCGCATAATCCTGGACATTCGCATGGACACA 37990 || || | ||| || | | || | || || | || ||||| || ||||||| Sbjct 2436 TAGTTCTTCAAATTCCT-CTCCAAAGCAGTCAGCGAGGCCAGGACAGTCATGAGGACACA 2494 Query 37991 TTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATG 38050 | ||| ||| ||||||| |||||||| | || |||||| | ||| |||| |||||| | Sbjct 2495 TGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAG 2554 Query 38051 CAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAA 38110 || ||| | ||| | | ||| |||||| || ||| ||||| |||| | | Sbjct 2555 CATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGA 2614 Query 38111 AATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTAT 38170 | || ||||| || || ||||| || |||| |||||| | | ||| || || | ||| | Sbjct 2615 ATTCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGT 2674 Query 38171 CACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATAC 38230 || || |||| | |||||| | || || ||||| | ||| ||||| || |||| || Sbjct 2675 TTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGAC 2734 Query 38231 CATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCG 38290 |||| || || || | || | ||| |||| ||||| ||||| || | | | Sbjct 2735 CATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTAT 2794 Query 38291 ACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATA 38350 || ||||| ||||| ||| ||| || ||||| || ||||||||||| |||||||| | Sbjct 2795 GTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAA 2854 Query 38351 TACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATG 38410 ||||||| || || || || || || | || | ||||| || | || ||| | Sbjct 2855 TACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCCGCG 2914 Query 38411 GAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAAT 38470 | || | ||| || | |||||| ||||||| | || |||| || |||| || Sbjct 2915 GTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCATAT 2974 Query 38471 TATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTA 38530 |||| || | ||| || ||| || || | || ||||| |||| || || ||||| | Sbjct 2975 TATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATGCCTATGGAGACTCTCATAA 3034 Query 38531 GCATATGTTGTGGTCTTTC 38549 |||| ||||| || ||||| Sbjct 3035 GCATGTGTTGAGGCCTTTC 3053 >seq13889 Length=23247 Score = 141 bits (156), Expect = 9e-29 Identities = 171/229 (75%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949 ||| |||| |||||| || ||||||||| ||||| |||||||||| |||||||||||| Sbjct 22907 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 22848 Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008 ||||||||||||||||| || | || || | ||| || || || | || | | Sbjct 22847 AATTTGAAATCCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGTGAGAAACGCT 22789 Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068 || | || |||||||| |||||||||||| || |||||| ||||||| | ||| || | Sbjct 22788 CCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGA 22729 Query 12069 TAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATCATCTAAATC 12114 |||| | ||| || |||| ||||| | |||||||| |||| || Sbjct 22728 TAAAATGTTTCTCACAATCTT---TTAATGTCTCCCAATCTGCTAAGTC 22683 >seq112584 Length=656 Score = 109 bits (120), Expect = 5e-19 Identities = 150/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725 || |||||||| || || ||||||||||||| ||||||||||| | ||||||||| Sbjct 73 ATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATT 132 Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785 | |||||| || || || ||||||||||| || |||||||| || | || | |||| Sbjct 133 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCT 192 Query 11786 CCATAT---ACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACG 11842 ||| || || | ||||| ||||| | | ||||| || || ||||| || || Sbjct 193 CCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACA 252 Query 11843 CATTCCATTGTTTCTATAGCGTTAAATAA 11871 ||| | ||||| || || || ||||| Sbjct 253 CATGGTAGAGTTTCAATTGCATTGAATAA 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467564148463200