Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5945 563 1e-155 seq67391 95.1 2e-14 seq13889 91.5 2e-13 seq46256 89.7 7e-13 seq69558 84.2 3e-11 >seq5945 Length=4136 Score = 563 bits (624), Expect = 1e-155 Identities = 1115/1622 (69%), Gaps = 41/1622 (3%) Strand=Plus/Plus Query 78698 TTATCTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 78757 |||| ||| | ||||| | || || ||||| | | | ||| ||||| || |||| | Sbjct 1277 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 1336 Query 78758 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGG 78817 |||||||||| ||||||| ||| | |||| ||| |||||| || ||| ||||| Sbjct 1337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 1396 Query 78818 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 78877 ||| | || | || | ||| || || | |||||||||||| || || || ||||| | Sbjct 1397 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 1456 Query 78878 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 78936 | || || ||||| | |||| || ||| ||| ||| ||||| | ||||| || || | Sbjct 1457 TATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACAAAT 1516 Query 78937 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 78993 | |||| | |||| |||| ||| | |||| | || |||||| | ||||| Sbjct 1517 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 1575 Query 78994 CTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 79053 || || || ||||||| ||| || | | || ||| | | || ||||| | Sbjct 1576 AGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 1635 Query 79054 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGT 79113 || ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||| Sbjct 1636 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 1695 Query 79114 TCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACC 79173 || | |||||| | || || | |||||| ||||| || || || |||||||| || | | Sbjct 1696 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 1755 Query 79174 AATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCC 79231 |||| | ||| | | ||| ||| | || || || ||||| || |||| |||| Sbjct 1756 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 1813 Query 79232 AAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATG 79291 |||| || | || | ||| | |||||| || || ||||| | || || | Sbjct 1814 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGA 1872 Query 79292 ATCCTGTG-TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350 ||| || ||||| || | ||||| ||||| |||||||||||||| || |||||| Sbjct 1873 CTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 1932 Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCA 79410 || || |||||||| ||||| || || | | ||||||| | ||||| || || Sbjct 1933 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 1992 Query 79411 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 79469 | | ||| | | | | | |||||| ||||| | || |||||||||||||| ||||| Sbjct 1993 TAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGG 2051 Query 79470 TCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 79529 |||||||||| |||| ||| ||| ||||| || | ||||||| |||||| ||| |||| Sbjct 2052 TCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAAC 2111 Query 79530 TTTATTGAGATTCCTGACTATTA--CTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 79587 ||| || | ||| ||| | | ||||| | || |||| ||| ||||| |||| Sbjct 2112 TTTGTTTAAATTT-TGAGTTACAATCTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAAT 2169 Query 79588 CGTCCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCA 79647 | || | ||||||||||| | || | || || || || || || || || ||| Sbjct 2170 CTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCA 2229 Query 79648 TTAGCATCCGCA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704 | | || | | ||||| | | |||||||| || || ||||| ||||| || || Sbjct 2230 T---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCA 2286 Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764 | ||||| ||||||||||||| ||||||| ||||||||||| | ||| | || |||||| Sbjct 2287 AGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCA 2346 Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-CT---TTATTATAGA 79820 || || | || | ||||||||||| ||||| | || |||| || || || || | Sbjct 2347 GTCTCCACTTGGGCTTCTATAATCGACTTCCATAACTCTTGAGCTCTGACTTGTTTTATA 2406 Query 79821 CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880 ||| |||||| ||| |||| ||||||| | ||| || || ||||| || | Sbjct 2407 A----ATCGTTTTTCTTCTTCATATTTGGTATATAGTTCTTCAAATTCCTCTCCA-AAGC 2461 Query 79881 A-TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTA 79939 | || | | |||||||| || | ||||||||| | ||| || |||| | | || Sbjct 2462 AGTCAGCGAGGCCAGGACAGTCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTA 2521 Query 79940 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 79999 ||| ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| | Sbjct 2522 CTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTT 2581 Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059 | || || ||||| ||||| || | ||| | ||| | | || || | |||||| || | Sbjct 2582 CTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCT 2641 Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119 | || || || || | | || || ||||||||||| || ||||||| ||||| || | Sbjct 2642 CTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAG 2701 Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 | || ||||| |||||||||||||| | | |||||| || ||||| || || | | Sbjct 2702 TATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTA 2761 Query 80180 TATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATT 80235 | || || ||| || | || || || || || |||||| || || || | Sbjct 2762 TGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAGAT 2817 Query 80236 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATC 80295 ||||| |||||||| ||| ||||||| |||||| | || || || |||||||| || || Sbjct 2818 TTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTC 2877 Query 80296 AT 80297 || Sbjct 2878 AT 2879 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 80478 CTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537 ||| || ||||| |||||||| || ||| ||||||||||||| ||||||||||||||||| Sbjct 3406 CTTATTTTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 3465 Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 80588 | ||| |||| || |||| ||| | |||| | ||| ||||| | ||| Sbjct 3466 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 3516 >seq67391 Length=3680 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 80689 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 || || || || || |||| ||| |||| ||||||||||| || |||||||||||||| Sbjct 3413 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 3354 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 3353 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 3294 Query 80809 GTTACTCCATTATATATTCC 80828 ||||| ||| |||||| || Sbjct 3293 GTTACACCAGAATATATGCC 3274 >seq13889 Length=23247 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 || |||| ||||||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 22535 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 22476 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || || || |||||||||||||||| ||||| || Sbjct 22475 CATATATCTGGATATTGGATTGGGAATATAACGAA 22441 Score = 89.7 bits (98), Expect = 7e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 50210 TTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 |||| ||| ||| | | ||| || || || || | | ||||| || ||||||| | Sbjct 22917 TTTCCTTAGGATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACAT 22858 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 |||| || || || |||||||| ||||| || || || || || | || || ||| Sbjct 22857 TTTCCATAGCAATTTGAAATCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTG 22798 Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389 | || || || | || || ||||| || || || ||| |||||||| || || || | Sbjct 22797 AGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGA 22738 Query 50390 CATGTTTTATAAAATGTTTTTC 50411 |||| || ||||||||||| || Sbjct 22737 CATGCTTGATAAAATGTTTCTC 22716 >seq46256 Length=4484 Score = 89.7 bits (98), Expect = 7e-13 Identities = 222/332 (67%), Gaps = 9/332 (3%) Strand=Plus/Plus Query 173691 TTATGACTCCA--ATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGGCGTT 173748 ||||||||||| |||| || |||||||| ||| | || | || || | | ||| | Sbjct 1328 TTATGACTCCAGTATTA--CCAATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1385 Query 173749 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 173808 ||||||| |||| || |||||| | || | ||||| ||||| ||| | || ||||| Sbjct 1386 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 1445 Query 173809 TCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 173868 |||||||| || ||||| | ||| | | | ||||| ||| | |||| Sbjct 1446 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCA 1505 Query 173869 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCA 173927 ||||| | || | ||||| || |||| ||||||||| ||| | | | || | | Sbjct 1506 CAAAGTTAGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGATGACT-TGA 1564 Query 173928 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTGGAA 173984 | |||||| ||||| | || | || || | ||| || ||| | || || || | Sbjct 1565 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 1624 Query 173985 GTTTAGGTATACACAAAAAGAAAGAATATAAA 174016 ||||||||| |||||| | ||||| |||| Sbjct 1625 CTTTAGGTATTCACAAACAATCAGAATTTAAA 1656 >seq69558 Length=3257 Score = 84.2 bits (92), Expect = 3e-11 Identities = 221/332 (67%), Gaps = 9/332 (3%) Strand=Plus/Plus Query 173691 TTATGACTCCA--ATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGGCGTT 173748 ||||||||||| |||| || |||||||| ||| | || | || || | | ||| | Sbjct 735 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 792 Query 173749 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 173808 ||||||| |||| || |||||| | || | ||||| || || ||| | || ||||| Sbjct 793 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATAAAATATGACGGAGAACGGGTTCAAGT 852 Query 173809 TCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 173868 |||||||| || ||||| | ||| | | | ||||||||| | |||| Sbjct 853 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 912 Query 173869 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTT-AAAAAAGCTACGTCTATCA 173927 ||||| | || | ||||| || |||| ||||||||| ||| | | | || | | Sbjct 913 CAAAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGACT-TGA 971 Query 173928 TATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATGTA---CCGCTACCGTTTGGAA 173984 | |||||| ||||| | || | || || | ||| || | || | || || || | Sbjct 972 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAGCCATTGCCTTTCGGTA 1031 Query 173985 GTTTAGGTATACACAAAAAGAAAGAATATAAA 174016 |||||||| |||||| | ||||| |||| Sbjct 1032 CATTAGGTATTCACAAACAATCAGAATTTAAA 1063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716796079609200