Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq112584 134 1e-26 seq13889 109 5e-19 >seq112584 Length=656 Score = 134 bits (148), Expect = 1e-26 Identities = 166/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 ||||||| ||| ||||||||| || ||||| || ||||| ||||||| |||||||| Sbjct 59 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTCAATCCGGGCATCAGACCTCGTTT 116 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 117 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAA 176 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 || |||| ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 177 AGCAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 236 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | || || |||| | | | ||||| |||||||||||||| Sbjct 237 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 281 >seq13889 Length=23247 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 || ||||| ||||| | ||| ||||| || || || | ||||| ||||| || ||| Sbjct 22900 ATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGA 22841 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 || ||||| || || || ||||| | | ||| ||||| | || | || ||||| Sbjct 22840 AATCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAG 22781 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 || |||||||||||||||||| ||||||||| ||||| || | | || ||||| | | Sbjct 22780 TTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGT 22721 Query 14110 TGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149 | ||| || || | | | | |||||| ||||| |||| Sbjct 22720 TTCTCACAATCTTTTAATGTCTCCCAATCTGCTAAGTCCT 22681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477607513489200