Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq20852 244 1e-59 seq22953 132 5e-26 seq20122 122 9e-23 seq19342 98.7 1e-15 >seq20852 Length=11699 Score = 244 bits (270), Expect = 1e-59 Identities = 480/696 (69%), Gaps = 28/696 (4%) Strand=Plus/Minus Query 19402 CCGACGTTGGGGTTCGCGCCATTGCCGCCTGGAAACTCCCAATCGATATCGACGCCATCG 19461 |||| || ||||| || || ||||| || || ||||||||||||||||| || |||||| Sbjct 2672 CCGAGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCG 2613 Query 19462 AAGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGATAAA-CGTCTGCCGTACGCT 19520 ||||||||||| ||| || |||| | || || | | ||| ||| | | | | | Sbjct 2612 AAGAATTTCCATGTTAGAAGGAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGAT 2553 Query 19521 CTTGTCGTGCATATGGTAAAATGGGTCCGAAAGTGTCCAGCCCCCGATCGAAGGTAGCAC 19580 ||||| | | | | || || || | ||| ||||| || || || || || || | Sbjct 2552 -TTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAAT 2494 Query 19581 TTTTAGATGAGGGTTCGCCAATTTGGCTGCCATAAGTTGGCCAAAGTTGCCTTTGTACGG 19640 || | | |||| || ||| || ||| | ||||||||||||||||||||| || Sbjct 2493 CTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGG 2434 Query 19641 TTCGTTCCATGCGCTGACA--CCTTTTTGGGGTTTCTGTATGGCCGCCCAAGGATCGTGA 19698 ||||||||| | |||| |||||||| ||||| |||| || ||||| |||||||| Sbjct 2433 CTCGTTCCAT--GAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 2376 Query 19699 ATGGCCACTTTGAAGTCGGCACGACCGGCACACGAACGTTGCAACGCTTCGAAACTGCCC 19758 || | ||||| ||||| |||| ||| ||| || || || | |||| ||||||||| Sbjct 2375 ATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 2316 Query 19759 GGGACAGTTTTGAGGGCATCATTGATGCCGTCGCCACCGCACATGGGCACGAAACCGTAC 19818 || ||| | ||||||||||||||| || ||||| || || | || ||||| Sbjct 2315 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 2256 Query 19819 AACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGTCGCGGATACACA 19878 | |||||| | | || ||| | || | ||| ||||| || | | ||||| ||| Sbjct 2255 AGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACA 2196 Query 19879 CCCCATTCGACAAAGTATGCACCTATGATCTTGTCCGAGCGCTTT--TCGAACCGTTTAT 19936 |||||||| || ||||| ||||| | | ||| ||| || ||| | |||| | |||| Sbjct 2195 CCCCATTCTACGAAGTAGGCACCCA-CAACTTTTCC-AGATGTTTGCTTGAACGGCTTAT 2138 Query 19937 TGTTTT----CGAGATA-ATCGTAGACGAGCGGTTCGAGATGCGATCCGTCCGTGTCGGC 19991 | |||| | | || || |||| || ||| | ||| ||| || || ||||| Sbjct 2137 TTTTTTCTCCCAATGTATATTCTAGAGGA--GGT---AAATGACTTCCATCGGTATCGGC 2083 Query 19992 TACGACAACTTTAACCGGTGCGCT-AGTCGAA---CAGCCGTCGACGTTGCACAGTTTCA 20047 ||||||| || ||||| | | | | ||| ||||||||| | ||||| |||| || Sbjct 2082 CACGACAATTT----CGGTGGGATCACTTGAACTGCAGCCGTCGTCATTGCAAAGTTCCA 2027 Query 20048 CAGTCATATCGTACTTGCCGCCCTTAGTAACGGGAA 20083 | ||||| | ||| | || || || | |||||||| Sbjct 2026 CTGTCATTTGGTATCTTCCACCTTTCGAAACGGGAA 1991 >seq22953 Length=36863 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||||| |||||||||| ||||| |||||||| |||||||| || | Sbjct 13543 CCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 13602 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| || ||||| |||||| |||| |||||||| ||||| || || Sbjct 13603 AGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 13662 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || ||||| || ||| || |||| | ||| | ||||| | || || ||| Sbjct 13663 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACT 13722 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | |||||||| || | ||| || || |||||||||||| Sbjct 13723 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 13770 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | |||||| || || |||| |||||||||||||| || || || ||| Sbjct 14227 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAA 14286 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| |||||| | ||| || ||||| | |||| |||||| ||||| ||||| Sbjct 14287 AGAGTGCGTCCGTCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 14346 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| |||||| ||||| | ||| | || || | ||||| ||| Sbjct 14347 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 14406 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || || || | |||||| || || || ||||| Sbjct 14407 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 14453 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | ||| | || || |||| || || ||||| || || ||||| || | Sbjct 13087 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 13146 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| | ||||| ||||| |||||||| |||| |||||||| ||||| ||||| Sbjct 13147 AGGGTGCGCCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 13206 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || ||| || ||| | | ||| | ||||| | || || ||| Sbjct 13207 ATTCCTTCCTTATCTTGAATCTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACT 13266 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || || || || | |||||| || ||||||||||| Sbjct 13267 TCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 13313 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | ||||| || | || || ||||| || || |||||||| | Sbjct 13315 CCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGAC 13374 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| |||||| | |||||| |||||| | || ||||| || || || || || Sbjct 13375 AAAGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGG 13434 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || || || ||||| ||| | | || | ||||| | ||||||||| Sbjct 13435 ATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACT 13494 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | ||||| || ||||||||||| || |||||||||||| Sbjct 13495 TCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCATA 13542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||||||||| || || || || | || || ||||| || || ||||| || Sbjct 12859 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 12918 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | || || || || || ||||| | || |||||||| ||||| || || Sbjct 12919 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 12978 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| || || ||| | | ||| | ||||| | |||||| ||| Sbjct 12979 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 13038 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | || | || || || |||| ||| ||||| || || |||||| || Sbjct 13039 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATACCT 13089 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | |||||||| | |||||||||||||| ||||| || || | Sbjct 12631 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 12690 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| || || | |||||||||||| |||| ||||| || || || || || Sbjct 12691 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 12750 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || ||||| || || || | | ||| | ||||| | || || || Sbjct 12751 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCCACC 12810 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | ||| | ||||| || || | || || ||||| || |||||| || Sbjct 12811 TCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCATACCT 12861 >seq20122 Length=23100 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || |||||| |||||||| | ||||| || || || || || || || | Sbjct 11088 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 11147 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||||| | ||||| ||||| || ||||| | ||||| | ||| ||||| ||||| Sbjct 11148 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 11207 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||||||||| ||| ||| || | | ||| | ||||| | | ||| ||| Sbjct 11208 ATGCCTTCTTTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACT 11267 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || ||||| |||| |||||| || || |||||||| Sbjct 11268 TCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 11314 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| ||||||||||| || || || || || || ||||| | ||||| ||||| Sbjct 10200 TGAAGGGTAGATTCTTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGC 10259 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || ||| | ||||| | ||| ||||| ||||| |||||||| ||||| ||| ||| Sbjct 10260 TTTCCGGCAAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTT 10319 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | ||| | || || | | ||||||||| | ||| | || ||||| ||| Sbjct 10320 GCCTTAACATTTTCGATAGTATCAGAAGCTTCTACTTCCAAAGTAATAGTTTTGCCAGTC 10379 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 |||||||| || || |||||||| Sbjct 10380 AATGTTTTCACAAAAATTTGCAT 10402 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| |||||| ||||| || | |||||||| || || || || || || | Sbjct 11772 CCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 11831 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||||| | ||||| ||||| || || || | ||||| | ||| ||||| ||||| Sbjct 11832 AGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 11891 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| ||| ||| |||| | ||| | || || | | ||| ||| Sbjct 11892 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 11951 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || || || || || ||||||||||| |||||||| Sbjct 11952 TCCAATGTGATAGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 11998 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 143046 ||||||||||| || ||||||||||| | ||||| || | ||||| || || || || Sbjct 11574 GTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCA-TCTTCTAGCTGCTTTCC 11632 Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106 |||| | || || | ||||||||| || || || || ||||| || |||||| ||| Sbjct 11633 AGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTT 11692 Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | ||| | || || | || || ||||| | ||| | |||||||| |||| ||| Sbjct 11693 AACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGT 11752 Query 143167 TTTTACGAATATTTGCAT 143184 |||||||| |||||||| Sbjct 11753 CTTTACGAAAATTTGCAT 11770 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| | ||| | |||||||| | |||||||| || || || ||||| || | Sbjct 11316 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 11375 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| || || || |||||| | || || | ||| || || ||||| Sbjct 11376 AGTGTACGTCCA-TCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGG 11434 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || |||||| || | | ||| | ||||| | ||| || || Sbjct 11435 AATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTGTCAGAGGGCTCAAC 11494 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | |||||||| |||| ||||||||| ||||||||||| Sbjct 11495 TTCCAGTGTGATAGTCTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 11542 >seq19342 Length=14378 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | || | || | ||| | ||| ||||| ||||| |||||||| || | Sbjct 4040 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 4099 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| ||||||||||||||| |||||| ||||||||| || || || Sbjct 4100 AATGTACGTCCA-TCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 4158 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||||| ||||| | ||| | || || | || || || Sbjct 4159 AATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCAC 4218 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || || || || | || || ||||| |||||||| Sbjct 4219 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 4266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505974830349600