Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq20852 215 4e-51 seq22953 98.7 8e-16 seq20122 91.5 1e-13 >seq20852 Length=11699 Score = 215 bits (238), Expect = 4e-51 Identities = 636/970 (66%), Gaps = 29/970 (3%) Strand=Plus/Minus Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAA- 101076 || || || || ||||||| |||||| || | || || || | ||| |||||||||| Sbjct 3128 TAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAG 3069 Query 101077 --ATAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACG 101134 | |||||| || || | || ||||| |||||||| || || ||||| ||||| Sbjct 3068 GGAATGTTGTCTTTGTAAT--CATGA-ACGCCAGTCCAACCACGACCATACATAGCAACA 3012 Query 101135 CCCACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGA---TTTAACAGCGTAA 101191 || || | ||| || || | || ||||| || ||| | ||| || || | Sbjct 3011 CCTACTACAATCTTCTTAGGATTCACTCCCTG---CGCCAGCAAGTATTTTACTCCGAAG 2955 Query 101192 TCCGTGTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCC 101251 || | |||| || || || ||||| |||||||| | || ||||||| || Sbjct 2954 TCAGATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCA 2895 Query 101252 AGATCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGG 101311 ||| |||||||| || || ||||| ||||| ||||| | || || | ||| | Sbjct 2894 AGAGTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATA 2835 Query 101312 AACTTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCA 101371 | ||||| || |||| | || || ||||| || || | ||||| ||| Sbjct 2834 TAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCA 2775 Query 101372 CTTGTTAATTCGTATGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCCAGCATTGCGCGCAA 101430 |||||||||||| | || || | | || || | ||| || ||||| | || || Sbjct 2774 GAAGTTAATTCGTATTTCTTACCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAA 2716 Query 101431 TTCTTTCAGTAAAATGTTGTACGTGTCAGCGTCGCGTTCTTTGTTGCCGAGTGTTGGGTT 101490 |||||||| ||| | || ||| | || |||| | | ||||| ||||| Sbjct 2715 TTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTT 2659 Query 101491 GGCGCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGTCAAAAAATTTCCAAAC 101550 || ||||| ||||| || |||||||||||||| || || || || || |||||||| Sbjct 2658 AGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGT 2599 Query 101551 CTGCAAAAATTCTTTGACAGAATCCACAAACACACGCCGTTTTATC---GCGTCGTGCA- 101606 | | || || || || || | |||||| ||| || || | | || | Sbjct 2598 TAGAAGGAACTCCTTTACTGACTGCACAAAT------CGTGTTCTCTTAGATTTGTCAAC 2545 Query 101607 TATAAT--AGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGCAAAATTTTAAGGTG 101664 || || |||| || |||| | ||||| || || || || || | ||| || | | Sbjct 2544 TAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTC 2485 Query 101665 TGGATTGGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCA 101724 || ||| ||| | ||||| || ||||||||||||||||||||||||||||| Sbjct 2484 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 2425 Query 101725 AGCAGATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGGATAGCAACTTT 101784 | ||| | ||||| || |||||||||| ||| ||||| ||||||||||| | ||||| Sbjct 2424 TGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 2365 Query 101785 AAAATCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCGGGTATGGTTTT 101844 ||| || |||||| || || || || | |||| ||||| || || ||| Sbjct 2364 AAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTT 2305 Query 101845 GAGGGCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTACAACAAATGTGA 101904 | || || | ||| || ||||| ||||| || || || ||||| | |||||| | Sbjct 2304 TAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGT 2245 Query 101905 GAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACGCCCCATTCTAC 101964 || || || | || | ||||| || || || | | ||| || ||||||||||| Sbjct 2244 AAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTAC 2185 Query 101965 AAAATACGCA 101974 || || ||| Sbjct 2184 GAAGTAGGCA 2175 >seq22953 Length=36863 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || || | | ||| ||||| || || |||||||||||||| || || || ||| Sbjct 14225 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGG 14284 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| ||||| ||||| || || || |||| | | |||||||| | Sbjct 14285 AAAGAGTGCGTCCGTCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 14344 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||| ||||| |||||| ||| || | ||| || |||| |||||| Sbjct 14345 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 14404 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 ||||| ||||||||||| || || | ||||| ||||| || |||||||| Sbjct 14405 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 14456 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||| || || || || || ||||| || || |||||||| || ||| | ||||| Sbjct 13332 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCGTCTTC 13391 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 ||||||||| || ||| |||| || | |||||| || ||| | ||| || || || Sbjct 13392 CAATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 13451 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 ||||| ||| || | ||| | || ||||| ||||| ||||||||| || Sbjct 13452 TATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 13511 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| ||||||||||| |||||||| Sbjct 13512 TCCAGTCAATGTTTTGACAAATATTTGCAT 13541 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || || | || ||| || |||||||| |||||||| ||||| || || ||||| Sbjct 13999 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAG-- 14056 Query 20042 ATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 ||| | | | |||||||| |||||| || ||| |||| |||||||||||||| || Sbjct 14057 ATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGG 14116 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | || |||||||| || ||| ||||| | | | || ||| ||||| Sbjct 14117 GAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTA 14176 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || | || |||||||| || || | || || ||||| || |||||| Sbjct 14177 CCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 14226 >seq20122 Length=23100 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065 || || ||||||||||| || || || || || || || |||||||| ||| Sbjct 10200 TGAAGGGTAGATTCTTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGC 10259 Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125 || || ||| |||| || || |||||||| || | |||||| ||||| ||| ||| Sbjct 10260 TTTCCGGCAAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTT 10319 Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185 || || | | | || ||| || ||| ||||| ||||| |||||||| ||| Sbjct 10320 GCCTTAACATTTTCGATAGTATCAGAAGCTTCTACTTCCAAAGTAATAGTTTTGCCAGTC 10379 Query 20186 AACGTTTTGACAAAAATTTGCAT 20208 || ||||| |||||||||||||| Sbjct 10380 AATGTTTTCACAAAAATTTGCAT 10402 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20012 GTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCC 20071 |||||||| ||||| || || || || || ||| |||||| | |||||||| Sbjct 10662 GTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCA 10721 Query 20072 GCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 20131 ||| |||| ||||||||||| || || | ||| ||||| || ||||||| || Sbjct 10722 GCAAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTATCCTGAATTTTTGCCTTA 10781 Query 20132 ACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTT 20191 || | ||| | ||| || |||| ||||| || || ||||| || |||| || Sbjct 10782 ACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTC 10841 Query 20192 TTGACAAAAATTTGCATT 20209 || ||||||||||||||| Sbjct 10842 TTTACAAAAATTTGCATT 10859 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| |||| || | ||| || ||||| | ||||| || || || || || || || Sbjct 11086 TTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 11145 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || || |||||||| ||| || || || |||| || || |||||||| | Sbjct 11146 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAG 11205 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||||||| ||| ||| || || | | | | || || |||| Sbjct 11206 GAATGCCTTCTTTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCA 11265 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | |||||| |||||||| |||| ||||| |||||||||||||| Sbjct 11266 CTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 11314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418748396672430