Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq20852 192 5e-44 seq19342 89.7 4e-13 >seq20852 Length=11699 Score = 192 bits (212), Expect = 5e-44 Identities = 780/1208 (65%), Gaps = 47/1208 (4%) Strand=Plus/Plus Query 30232 TACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGA-CTTAGTTCCCGTCCC 30290 ||||| ||||| |||||||| || || ||| || | || | || | || | || Sbjct 2179 TACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTA-TACCTATACC 2237 Query 30291 CAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACGA 30350 || ||||| ||| | | || |||||| | || | ||||| || || || || || || Sbjct 2238 TAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAATGA 2297 Query 30351 TAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGTCGAGA 30410 ||| ||||| | | || || | || |||| || || || || || Sbjct 2298 TAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGA 2357 Query 30411 GGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAGT 30470 ||| |||||||| | || |||||| |||| || | |||||||||||||||||| | Sbjct 2358 GGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATT 2417 Query 30471 GGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAAAGACA 30530 | | ||| |||| || || ||||| || ||||||||| | ||| | | |||| | Sbjct 2418 GTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTC-ACTAAA----A 2472 Query 30531 CAATCCCGACC-----TTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGCGACCCT 30585 ||| |||| || | | |||| | || |||||||| |||||||| ||| ||| ||| Sbjct 2473 CAAGCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCT 2532 Query 30586 TTCTTTAAATTGAGTTCTGCCGAA---AATCGCGC-CGTTTTCGTTGAGTCCGCACGAGA 30641 ||| || || ||| || | || || | | || ||| || |||| | | || Sbjct 2533 TTC-TTCTTTTTAGT--TGACAAATCTAAGAGAACACGATTT-GTGCAGTCAGTAAAGGA 2588 Query 30642 GTATTTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGG 30701 || | | ||||||||||| || || || | || ||||| |||||||| || || || Sbjct 2589 GTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGG 2648 Query 30702 TAAAGGTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAACATATGTGCAGTT 30761 ||||||||||| || || | || |||||| ||||| | ||||| || Sbjct 2649 CAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTGTTATGTAAGTTT 2705 Query 30762 ATTGAAAGAGCTCAGAGAAATGCTAAACGATCTTTC--TAAAGAAACAGGGAAAAAATAC 30819 ||||||| | | || ||||| | || || || ||||| || || |||||| Sbjct 2706 GATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAA--TGGTAAGAAATAC 2763 Query 30820 CAGCTCACCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATAGTTAATTATGAAAAT 30879 | | || || || |||||||| || | ||||||||| | ||| | || | || Sbjct 2764 GAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAG 2823 Query 30880 GCGCAAGAGTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAAGGCGCTTGGTCT 30939 || ||| | ||| | ||||| ||||| | |||| ||||| || || || || ||||| Sbjct 2824 GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTC- 2882 Query 30940 AACACGGACT-TGGGATATCACACTACACTTTATTCACCCTCTTGGAACGCTGAAGAAAA 30998 || ||| | ||| |||| || || | || | || | ||||| | | |||| Sbjct 2883 AAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAAC 2942 Query 30999 ATATACTGCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAATAGTAAGAAAAT 31058 || || | || | || ||| | ||| | || || ||| |||||| || Sbjct 2943 TTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGAT 3002 Query 31059 AGTGCTAGCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGACATAAAAAACAA 31118 || ||| |||||| ||||| || | || ||||| || || ||||| ||| |||| Sbjct 3003 TGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACAAAGACAA 3062 Query 31119 CAATCCCTTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGAAAGTGGAGTTGT 31178 || |||||| || || ||| || || | |||||||||||| || ||||| || Sbjct 3063 CATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGT 3122 Query 31179 AGATTACA--AAGATT-----TGATA----CAAAGGTACACCGACACTT--ATTATGACT 31225 || |||| ||||| ||| | |||| | | | | || |||| ||| Sbjct 3123 TGACTACAGGGAGATTGCGAATGAAATTGCTCAAGGCA-AGTGGGAGTTCCATTACGACA 3181 Query 31226 CTGTAGCGCAAGCGGCATATGCGTTCGCAGAGAAT--GTTGGTGATCTACTTACTTACGA 31283 ||| || ||||| | || |||| |||| || ||| ||||| | || || || Sbjct 3182 ATGTCGCCCAAGCCCCCTA--CGTTTTCAGACCATCAACTGGAGATCTTGTAACCTATGA 3239 Query 31284 TAACCCAACGAGTGTGCAAGCTAAGGGAAAGTTTGTAATAGACAACAATTTGGGTGGTTT 31343 ||| | | || | ||||| || | ||||| | | ||||| | || ||| | Sbjct 3240 TAATGCTAGATCCGTTATTGAAAAGGGTAAATATGTAAGAAATAACAAGCTAGGAGGTCT 3299 Query 31344 GTTTGCGTGGGAACTGGACGCCGACAATGGCGACATTCTTAACAGCATGAACGAGGGTTT 31403 ||||| |||||| ||||||| || || || ||| | || || ||||||| |||| | Sbjct 3300 CTTTGCTTGGGAAGTGGACGCTGATAACGGTGACCTACTGAATGCCATGAACATGGGTCT 3359 Query 31404 AGGTAATA 31411 ||||||| Sbjct 3360 CGGTAATA 3367 >seq19342 Length=14378 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||||||||| | | | ||| | ||| | |||| ||||||||||||||||| |||| Sbjct 4039 ACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 4098 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 |||| || | || || || || ||||| | | || ||||| ||||| || || Sbjct 4099 CAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 4158 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||| || ||||| || | | |||| ||||| | | |||| Sbjct 4159 AATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCAC 4218 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 ||||| || ||||||||||| || || || || || ||||| ||||| ||| Sbjct 4219 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 4270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420409070144030