Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq140208 131 9e-26 seq30309 131 9e-26 seq44851 129 3e-25 seq44156 127 1e-24 seq81661 125 4e-24 seq5475 125 4e-24 seq130020 123 1e-23 seq121550 122 5e-23 seq105530 120 2e-22 seq29821 120 2e-22 seq32285 118 6e-22 seq13818 118 6e-22 seq5862 118 6e-22 seq95235 116 2e-21 seq98416 114 7e-21 seq98037 114 7e-21 seq32286 114 7e-21 seq29770 114 7e-21 seq2739 114 7e-21 seq95234 107 1e-18 >seq140208 Length=876 Score = 131 bits (144), Expect = 9e-26 Identities = 92/106 (87%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||||||| | || |||||| || ||||||||||| |||||||||| ||||||||| Sbjct 277 AAATATATTAAAAACAAAAAAGAAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 336 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||||||||||||||||| |||||||||||||||||||||| || Sbjct 337 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGTTGA 382 >seq30309 Length=915 Score = 131 bits (144), Expect = 9e-26 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| ||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||| Sbjct 145 TTATTAAAATATCAA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 203 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||| |||||||||||||||||||||| Sbjct 204 ACGACGCTCTAACCAACTGAGCTAATGGGCCGT 236 >seq44851 Length=2291 Score = 129 bits (142), Expect = 3e-25 Identities = 87/97 (90%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||||| |||| ||| ||||||||||| |||||||||| ||||||||||||||| Sbjct 694 AATTAATATAAAAAAAAAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 635 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||| |||||||||||||||||||||| Sbjct 634 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 598 >seq44156 Length=1703 Score = 127 bits (140), Expect = 1e-24 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 11439 TTAATAAAAAA-TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||||||||||| | | ||||||||||| |||||||||| |||||||||||||||||| Sbjct 921 TTAATAAAAAAATTGATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 980 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||| |||||||||||||||||||||| Sbjct 981 CACGACGCTCTAACCAACTGAGCTAATGGGCCGT 1014 >seq81661 Length=2045 Score = 125 bits (138), Expect = 4e-24 Identities = 85/95 (89%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAA--TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 ||||||| ||||| | | |||||||||||| |||||||||| ||||||||||||||| Sbjct 2030 AATTAATTAAAAAGATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 1971 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||||||||| Sbjct 1970 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1936 Score = 120 bits (132), Expect = 2e-22 Identities = 82/93 (88%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||||| | |||| | ||||||||||| |||||||||| ||||||||||||||||| Sbjct 655 AATTAAAATAAAAAGATCTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 596 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 595 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 563 >seq5475 Length=30910 Score = 125 bits (138), Expect = 4e-24 Identities = 79/86 (92%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 9172 AAAAAATAAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 9113 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 9112 GCTCTAACCAACTGAGCTAATGGGCC 9087 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 24442 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 24383 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 24382 TGAGCTAATGGGCC 24369 >seq130020 Length=506 Score = 123 bits (136), Expect = 1e-23 Identities = 88/102 (86%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||||||| | || |||| | || ||||||||||| |||||||||| ||||||||| Sbjct 266 AAATATATTAAAAACAAAATAGAAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 207 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||| ||||||||||||||||||||| Sbjct 206 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 165 >seq121550 Length=1342 Score = 122 bits (134), Expect = 5e-23 Identities = 84/96 (88%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 11436 GAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||| || ||||||| ||||||||||| |||||||||| |||||||||||||||| Sbjct 449 GAAATATAAAAAAATAGTGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 390 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||||| |||||||||||||||||||||| Sbjct 389 AGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 354 >seq105530 Length=894 Score = 120 bits (132), Expect = 2e-22 Identities = 88/100 (88%), Gaps = 6/100 (6%) Strand=Plus/Plus Query 11437 AATTAA--TAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||||| |||||| ||| ||||||||||| |||||||||| |||||||||||||| Sbjct 246 AATTAAATTAAAAAGATC---TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 302 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 ||||||||||||||| ||||||||||||||||||||| || Sbjct 303 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGACG 342 >seq29821 Length=5649 Score = 120 bits (132), Expect = 2e-22 Identities = 88/102 (86%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 |||| ||||| |||| | | || | ||||||||||| |||||||||| |||||||| Sbjct 1332 AAATTTAGAAAAAATATATATATATATTTGGCCCATGAGGGGATCGAACCCGCGACCTTC 1391 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| |||||||||||||||||||| Sbjct 1392 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1433 >seq32285 Length=1306 Score = 118 bits (130), Expect = 6e-22 Identities = 80/89 (90%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| || || ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 507 AATAAAAATACATAT-GGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 449 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 448 GACGCTCTAACCAACTGAGCTAATGGGCC 420 >seq13818 Length=2156 Score = 118 bits (130), Expect = 6e-22 Identities = 78/87 (90%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 927 TAAATAATTTGATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 868 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 867 CGCTCTAACCAACTGAGCTAATGGGCC 841 >seq5862 Length=9487 Score = 118 bits (130), Expect = 6e-22 Identities = 77/85 (91%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 5105 AAAAATCA---TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 5161 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 5162 CTCTAACCAACTGAGCTAATGGGCC 5186 >seq95235 Length=425 Score = 116 bits (128), Expect = 2e-21 Identities = 77/85 (91%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 60 Query 11516 TGAGCTAATGGGCC-GTCGACGATT 11539 |||||||||||||| || |||||| Sbjct 61 TGAGCTAATGGGCCAGTGAACGATT 85 >seq98416 Length=770 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 651 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 592 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 591 TGAGCTAATGGGCCG 577 >seq98037 Length=1212 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1212 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1153 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 1152 TGAGCTAATGGGCCG 1138 >seq32286 Length=777 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 660 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 601 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 600 TGAGCTAATGGGCCG 586 >seq29770 Length=15067 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 14144 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 14203 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 14204 TGAGCTAATGGGCCG 14218 >seq2739 Length=6332 Score = 114 bits (126), Expect = 7e-21 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| | | |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 6262 AAAAAGAAGAATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 6203 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 6202 CTCTAACCAACTGAGCTAATGGGCC 6178 >seq95234 Length=417 Score = 107 bits (118), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 5 GGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGG 64 Query 11528 CC-GTCGACGATT 11539 || || ||||||| Sbjct 65 CCAGTGGACGATT 77 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260968448856280