Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq20122 147 2e-30 seq22953 140 3e-28 seq19342 89.7 5e-13 >seq20122 Length=23100 Score = 147 bits (162), Expect = 2e-30 Identities = 179/242 (74%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || ||| || | | |||||||| |||||||||||||||||||| || | Sbjct 11760 AAAATTTGCATTCCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATA 11819 Query 94829 TTATAATCGCTCATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 ||||| | || | ||||| | ||| ||||| || |||||| | || || | ||||| Sbjct 11820 TTATAGT--CTGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTT 11877 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 | |||||||||||||| ||||| ||||| | ||| |||||||| ||| ||| || | Sbjct 11878 GTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTAT 11937 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 ||| || || || | ||||| ||||| ||||| | |||||| || ||||| |||| Sbjct 11938 CAGAAGCTTCCACTTCCAATGTGATAGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCA 11997 Query 95007 TG 95008 || Sbjct 11998 TG 11999 Score = 136 bits (150), Expect = 4e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| ||||| | ||||| || || ||||||||||| ||||| || | Sbjct 11075 AAAAATTTGCATTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGAT 11134 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||||| || || ||| ||| ||||| || ||||| | || || | |||||| Sbjct 11135 ATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTG 11194 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||| |||||||| ||||||||||| | ||| |||||||| || ||| ||||| Sbjct 11195 TTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTC 11254 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || ||||| ||||| || ||||||||||| || ||||| Sbjct 11255 AGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 11314 Score = 125 bits (138), Expect = 6e-24 Identities = 185/261 (71%), Gaps = 1/261 (0%) Strand=Plus/Plus Query 94748 TTTATCGCTAACGGTTTTTT-AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTG 94806 |||| | ||| |||||| |||| ||| || || ||||| | |||| || ||||| Sbjct 10598 TTTACCAGTAAGTGTTTTTACAAAAATTTGCATCCCACCTCTTAGACGCAGAACTAAGTG 10657 Query 94807 CAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTT 94866 |||||||||||||||||| | ||||| || || |||| ||| || |||||||| Sbjct 10658 CAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTT 10717 Query 94867 TCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGC 94926 || |||| || | || || || ||||||||||| || ||||| || | ||||||||| Sbjct 10718 GCCAGCAAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTATCCTGAATTTTTGC 10777 Query 94927 CTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAG 94986 ||| || | | || |||| || || || | ||||| ||||| ||||| || Sbjct 10778 CTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAG 10837 Query 94987 AGTTTTCACAAAGATCTGCAT 95007 || || ||||| || ||||| Sbjct 10838 TGTCTTTACAAAAATTTGCAT 10858 Score = 125 bits (138), Expect = 6e-24 Identities = 174/242 (72%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| ||||| | ||||| || || ||||||||||| ||||| || | Sbjct 10847 AAAAATTTGCATTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGAT 10906 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||||| | || | | ||| || ||| ||||| || ||||| | || || | |||| Sbjct 10907 ATTATAGT--CTGACAATGTGCGACCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTT 10964 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||||||||||||||| ||||| | |||||| || || || | | || Sbjct 10965 TGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCTATTGTA 11024 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| || || || | ||||| ||||| ||||| || || || ||||| || ||| Sbjct 11025 TCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGC 11084 Query 95006 AT 95007 || Sbjct 11085 AT 11086 Score = 122 bits (134), Expect = 8e-23 Identities = 174/244 (71%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 94765 TTTAA-AATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTT 94823 ||||| || ||||||| || ||||| | || | || | ||| | |||||||| || | Sbjct 10159 TTTAAGAACTTTACACACCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCT 10218 Query 94824 GCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATC 94883 | | ||||| || || ||| ||| ||||| || |||||| |||| || | || Sbjct 10219 GGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCAAAAATCAGTC 10278 Query 94884 TTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAG 94943 |||| |||||||||||||| ||||| ||||| | ||| |||||||| || ||| || Sbjct 10279 TTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATAG 10338 Query 94944 TGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCT 95003 | |||| || || || | || || ||||| ||||| | ||||||||||| || | Sbjct 10339 TATCAGAAGCTTCTACTTCCAAAGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTT 10398 Query 95004 GCAT 95007 |||| Sbjct 10399 GCAT 10402 Score = 118 bits (130), Expect = 9e-22 Identities = 178/250 (71%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 94761 GTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCC 94819 |||||| |||| ||| || ||| ||||||| || | || | ||||||||||||||| Sbjct 11523 GTTTTTACAAATATTTGCATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCT 11582 Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGA 94877 || || | ||| ||||| ||||||| | ||| || ||||| ||||| |||| | Sbjct 11583 TTCTGAATGTTGTAATCAG--ATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAA 11640 Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937 | | ||||||||||||||| ||||| || ||||| || | |||||| || || || Sbjct 11641 TAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTT 11700 Query 94938 CGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997 | | || |||| | || || || | ||||| || || ||||| || || || || | Sbjct 11701 CAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGA 11760 Query 94998 AGATCTGCAT 95007 | || ||||| Sbjct 11761 AAATTTGCAT 11770 Score = 111 bits (122), Expect = 1e-19 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||||| || | || || || |||||||||||||| || | Sbjct 10391 AAAAATTTGCATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAAT 10450 Query 94828 GTTATAATCGCTCATAGTGTTGG--AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| || | || | ||||| | ||| || || |||||||| | || || | || Sbjct 10451 GTTGTAGT--CTGACAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTC 10508 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || ||||||||||| || || || || | ||||||||| || || | | ||| Sbjct 10509 TGTTGGTCTGGAGGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTG 10568 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || |||| || || ||||| |||||||| ||||| ||||| || ||| Sbjct 10569 TCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGTGTTTTTACAAAAATTTGC 10628 Query 95006 AT 95007 || Sbjct 10629 AT 10630 Score = 111 bits (122), Expect = 1e-19 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||||| || | || || || |||||||||||||| || | Sbjct 11303 AAAAATTTGCATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAAT 11362 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || || || || |||| | ||| || ||||| ||||| |||| || | ||| Sbjct 11363 ATTGTAGTCAGACA--GTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTT 11420 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || ||||||||||| ||||| || || | |||||| ||||| || | | ||| Sbjct 11421 TGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTG 11480 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | | || || || | ||||| || || ||||| || ||||| ||||| || ||| Sbjct 11481 TCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTTTTTACAAATATTTGC 11540 Query 95006 AT 95007 || Sbjct 11541 AT 11542 >seq22953 Length=36863 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA 94851 ||||| || || || | |||||||||||||| | |||||||| | | || || | Sbjct 14011 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAAT-GTACGGCC 14069 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||| |||||||| |||| || | || || |||||||| |||||||| ||||| Sbjct 14070 ATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTT 14129 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || |||||||| || ||| |||||| | | || || || | ||||| Sbjct 14130 GTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCTAAAGTGAT 14189 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||| |||||||| || |||||||||||||| Sbjct 14190 GGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 14225 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 || || |||||||||||||| ||||| | |||||| || || |||| | ||||||| Sbjct 12649 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCC 12708 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | |||||| || ||||||| | | || || ||||| ||||| || || ||||| | Sbjct 12709 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 12768 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || ||| |||||||| | || || || | |||||||| || Sbjct 12769 ATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCCACCTCCAAAGTGATGGTCTTC 12828 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| || || ||||||||||| Sbjct 12829 CCAGTAAGAGTCTTAACGAAGATCTGCAT 12857 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | ||||||||| ||||| | ||||| ||| | |||| Sbjct 14239 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAAAGAGTGCGTCCG 14298 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || | || ||||| | || || || | ||| |||||||||||||| ||||| ||| Sbjct 14299 TCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 14358 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| || || || | | ||| || | | || || || | || ||| Sbjct 14359 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 14418 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || ||||| |||||||||||||||||||| Sbjct 14419 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 14453 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||||| || || || |||||||||||||| || || || || | || || || Sbjct 12859 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 12918 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || || | || || | | ||| |||||||| ||| Sbjct 12919 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 12978 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| |||||||| | || || || || || | | |||||| | | | || || Sbjct 12979 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 13038 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| ||||| || || || || || |||||||||||||| Sbjct 13039 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 13085 >seq19342 Length=14378 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | ||| | ||| | ||||| || ||||||||||| | ||| || || | Sbjct 4040 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 4099 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || ||| || || ||||| || ||||||| || | |||||| ||||| ||| Sbjct 4100 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 4159 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| || || | ||||| || || || | | ||| |||| | || || Sbjct 4160 ATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACC 4219 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || |||||||| || ||||| || || || || || ||||| Sbjct 4220 TCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 4266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447372034930800