Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_006647.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq16400 179 2e-41 >seq16400 Length=3132 Score = 179 bits (198), Expect = 2e-41 Identities = 125/141 (89%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 218 CAGGGTTCCATAAATGACGGACAGGAAAAttttttgacctattttgatgttttttttCGT 277 ||| ||| |||| |||||||| ||||| |||||||||||||||||| |||| ||| ||| Sbjct 914 CAGAGTTTCATACATGACGGATAGGAATTTTTTTTGACCTATTTTGAGGTTTATTTCCGT 855 Query 278 TTCTAGTGCACTAAATCAATTTTTGAAAAGTGTCAAATTAATCTCTATTAAATTATCTTG 337 ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 854 TTCTAGTAAACTAAATCAATTTTTGAAAAGTGTTAAATTAATCTCCATTAAATTATCTTG 795 Query 338 ACAATAGTAT-GCAAAATATC 357 |||||||||| | ||||||| Sbjct 794 ACAATAGTATAACCAAATATC 774 Score = 82.4 bits (90), Expect = 4e-12 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 42 GTCTTGTGGCTTTTTTATTTTATTAATTGTATATGAACGACACTGAATTACCTAACCATT 101 ||||| |||||||||| |||| ||||||||| || || || |||||||||||||| |||| Sbjct 1190 GTCTTCTGGCTTTTTT-TTTTGTTAATTGTACATTAATGATACTGAATTACCTAATCATT 1132 Query 102 CGCATTTAGCGACTTACAATTCTCTCCAAG 131 |||||| | | | |||||| || | ||| Sbjct 1131 CGCATTCGGTGGCCCACAATTATCCCAAAG 1102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27945136455080