Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5945 544 1e-149 seq67391 91.5 2e-13 seq13889 86.0 8e-12 >seq5945 Length=4136 Score = 544 bits (602), Expect = 1e-149 Identities = 1109/1624 (68%), Gaps = 45/1624 (3%) Strand=Plus/Plus Query 61975 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 62034 |||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| | Sbjct 1277 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 1336 Query 62035 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 62094 |||||||||| ||||||| ||| | |||| ||| ||||| || ||| ||||| Sbjct 1337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 1396 Query 62095 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 62154 ||| | || | || | ||| || || | |||||||||||| || || || ||||| | Sbjct 1397 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 1456 Query 62155 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 62213 | || || ||||| | |||| || ||| ||| ||| ||||| | ||||| || || | Sbjct 1457 TATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACAAAT 1516 Query 62214 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 62270 | |||| | |||| |||| ||| | |||| | || |||||| | ||||| Sbjct 1517 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 1575 Query 62271 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 62330 || || || || |||| ||| || | | || ||| | | || ||||| | Sbjct 1576 AGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 1635 Query 62331 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62390 || ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||| Sbjct 1636 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 1695 Query 62391 TCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62450 || | || ||| | || || | |||||| ||||| || |||||||||||||| || | | Sbjct 1696 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 1755 Query 62451 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCC 62508 |||| | ||| | | ||| ||||| || || || ||||| || |||| | || Sbjct 1756 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 1813 Query 62509 AAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTAC 62567 |||| || | || || || ||||| | || || | || Sbjct 1814 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGAC 1873 Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 ||| |||||| ||||| ||||| || ||||||| ||||||||| || |||||| Sbjct 1874 TC-CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 1932 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||||| |||||||| ||||| || || | | ||| ||| | ||||| | || || Sbjct 1933 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 1992 Query 62688 AATGGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746 | | ||| | | | | | |||||| || || | || |||||||||||||| ||||| Sbjct 1993 TAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGG 2051 Query 62747 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62806 |||||||||| |||| || ||| ||||| || | ||||||| |||||| ||| |||| Sbjct 2052 TCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAAC 2111 Query 62807 TTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 62863 ||| || | |||| | ||||| ||||| | || || | ||| ||||| ||| Sbjct 2112 TTTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAA 2168 Query 62864 TCGCCCATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTC 62923 || || | ||||||||||| | || | || || || || || || || || || Sbjct 2169 TCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTC 2228 Query 62924 ATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCC 62980 || | || | | ||||| | | ||||||||||||||| ||||| || ||||| || Sbjct 2229 AT---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCC 2285 Query 62981 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 63040 | ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||| ||||| Sbjct 2286 AAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACC 2345 Query 63041 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 63100 ||| || | || | ||||||||||| ||||| | || |||| | | | | ||| Sbjct 2346 AGTCTCCACTTGGGCTTCTATAATCGACTTCCATAACTCTTGAGCTCTGACTT--GTTTT 2403 Query 63101 GTATCTCCTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63158 || || ||| |||| || ||| ||||| | | ||| || || ||||| || || Sbjct 2404 ATAAATCGTTTTTCTTCTTCATATTTGGTATATAGTTCTTCAAATTCCTCTCCA-AAGCA 2462 Query 63159 TTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC-- 63215 | | | |||||||| |||| |||||||| | ||| || |||||||| Sbjct 2463 GTCAGCGAGGCCAGGACAGTCATGAGGACACATGAGACTCCAAACT---TCATCCTTTTC 2519 Query 63216 -ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63274 |||| ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| Sbjct 2520 TACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCAT 2579 Query 63275 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 ||| || || ||||| ||||| || | ||| | ||| | | || || | |||||| || Sbjct 2580 TTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGG 2639 Query 63335 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63394 || || || || || | | || || ||||||||||| || ||||||| ||||| || Sbjct 2640 CTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGC 2699 Query 63395 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGA 63454 || || ||||| |||||||||||||| | | ||| ||||| | ||||| || || | Sbjct 2700 AGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGC 2759 Query 63455 GATATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCA 63510 || || || ||| || | || || || || || |||||| || || || Sbjct 2760 TATGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAG 2815 Query 63511 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGA 63570 |||||| |||||||| ||| ||||||| || ||| | ||||| || |||||||| || Sbjct 2816 ATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTT 2875 Query 63571 TCAT 63574 |||| Sbjct 2876 TCAT 2879 Score = 96.9 bits (106), Expect = 4e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 63755 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63814 ||| || ||||| |||||||| || ||| ||||||||||||| ||||||||||||||||| Sbjct 3406 CTTATTTTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 3465 Query 63815 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865 | ||| |||| || |||| ||| | |||| | ||| ||||| | ||| Sbjct 3466 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 3516 >seq67391 Length=3680 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 63966 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCC 64025 || || || || || |||| ||| |||| ||||||||||| || | |||||||||||| Sbjct 3413 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 3354 Query 64026 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64085 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 3353 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 3294 Query 64086 GTTACTCCATTATATATTCC 64105 ||||| ||| |||||| || Sbjct 3293 GTTACACCAGAATATATGCC 3274 >seq13889 Length=23247 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849 || |||| ||||||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 22535 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 22476 Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 || || || ||||||||||||||| ||||| || Sbjct 22475 CATATATCTGGATATTGGATTGGGAATATAACGAA 22441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621669924634800