Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq20852 214 2e-50 seq66326 145 6e-30 seq22953 107 2e-18 seq19342 102 7e-17 seq20122 98.7 8e-16 >seq20852 Length=11699 Score = 214 bits (236), Expect = 2e-50 Identities = 526/787 (67%), Gaps = 23/787 (3%) Strand=Plus/Plus Query 32176 TGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTT 32235 ||| || || ||||||||||| || || | || ||||| | || | || | Sbjct 2175 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTAT 2234 Query 32236 GCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAA 32295 || ||| | | ||| || | ||||| |||||||| ||||||||||| ||||| | || Sbjct 2235 ACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 2294 Query 32296 CGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCG 32355 ||| | ||| ||| |||||||| | || || || || || || | ||||| Sbjct 2295 TGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCG 2354 Query 32356 CGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGG 32415 | |||||||| || | || ||||| || ||||| ||| |||||||||| || || || Sbjct 2355 TGAGGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 2414 Query 32416 CGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTT 32475 ||||| | |||||||| |||||||||||||||||||||||||| ||| | || Sbjct 2415 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 2474 Query 32476 GGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCC--- 32532 || |||| | | || ||| | ||||||||||| ||||||||| | | ||||| Sbjct 2475 AGCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTT 2534 Query 32533 CTTTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTT 32592 ||| | ||| | || | | || | |||| ||||| | || || || ||||| Sbjct 2535 CTTCTTTTTAGTTGACAAATC--TAAGAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTT 2591 Query 32593 TTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAA 32652 | | ||||||||||| || || || || || |||||||||||||| || ||||| Sbjct 2592 CCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 2651 Query 32653 AGGTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTT 32712 |||||| ||||| | ||||||| | || || | | || | | |||| | Sbjct 2652 AGGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGAT 2708 Query 32713 ACAAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGT 32771 ||||||| ||| ||||| || || || ||| | | | || || | ||||| | Sbjct 2709 GAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCT-AAGAATGGTAAGAAATACGAAT 2767 Query 32772 TGACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATG--AAGCCGC 32829 | ||| || ||||| || || || ||||| || || | || | ||| || Sbjct 2768 TAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAG--GC 2825 Query 32830 GCAAAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAA 32889 ||||| || | ||| | || || | |||||||||||||| || || || ||||| || Sbjct 2826 TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAA 2885 Query 32890 CACCGAT----TTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAAT 32945 ||| |||| | |||| || | |||||||| || ||||||||| | ||| Sbjct 2886 ---TGATACTCTTGGAC-ATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAA 2941 Query 32946 TGTACAC 32952 ||||| Sbjct 2942 CTTACAC 2948 >seq66326 Length=6876 Score = 145 bits (160), Expect = 6e-30 Identities = 179/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317 |||||| ||| || || |||||||| || |||| ||| | || || |||| ||||| Sbjct 5481 TGCGCAGCTTCAGC-GACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAA 5423 Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377 || || || | ||||| |||||||| || ||||| || || || || ||||||||||| Sbjct 5422 GCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGG 5363 Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437 | || ||||||||| ||||| | ||||||| | | ||||||||| ||||| ||||| Sbjct 5362 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGG 5303 Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497 ||| | |||||| ||| || || || ||||| || || || || | | ||||| || Sbjct 5302 TGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAGGCG 5243 Query 109498 TG 109499 || Sbjct 5242 TG 5241 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 109048 GGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATA 109107 || || |||||| |||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 5767 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 5708 Query 109108 ATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGT 109167 ||| ||| ||| ||||||||| || || ||||| | | | ||||| ||||| Sbjct 5707 ATGAAATGGGTTGCGGGTGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAGTGC 5648 Query 109168 CCGTTC 109173 || ||| Sbjct 5647 CCCTTC 5642 >seq22953 Length=36863 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || || || || || || || || | ||| |||| ||| | Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGAG-CCATC 13711 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | | ||||| || ||| |||||||| || | ||| ||||| Sbjct 13710 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 13651 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| |||||||| ||||||||| ||| || | || || || Sbjct 13650 ACAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 13591 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||||||||||||| | ||| | || || | ||||||| || Sbjct 13590 CATCCAAAAAGAGTCTACTCTTCATTTAGTACTGCGTCTGCGAGGTGG 13543 Score = 104 bits (114), Expect = 2e-17 Identities = 172/247 (70%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 115269 TTTATAAGAGAT-TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 ||| | | |||| | |||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct 14471 TTTGTTACAGATATCAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACT 14412 Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387 | ||| || | ||| ||| ||| | | |||||| |||||| || || ||| Sbjct 14411 TTGGAAGTTGAACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAA 14352 Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447 ||| | || ||||| ||| | | |||| || || || ||||||||||| | Sbjct 14351 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGC 14292 Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGA 115507 || | |||| ||||| ||||||||||| |||||| | || |||| ||| | | || Sbjct 14291 ACTCTTTCCGACTATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGT 14232 Query 115508 GGAGGAA 115514 || |||| Sbjct 14231 GGTGGAA 14225 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| | || ||||| ||||||||| | ||| || ||| | Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGA-ACCATC 13483 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | || ||| ||||| ||||| || ||| ||||| || || Sbjct 13482 TGACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCA 13423 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || |||| ||| || |||||||| ||||| | || || | ||||| || Sbjct 13422 ACAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAA 13363 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||||| |||||||| || Sbjct 13362 TATTCAGAAAGAGTCAAC 13345 >seq19342 Length=14378 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| |||||||||||| |||| |||| || Sbjct 4267 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 4208 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| | | | | |||||| ||||| ||||| ||||| | || || || Sbjct 4207 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 4148 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || |||||| ||||||||| || || | || || || Sbjct 4147 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 4088 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||| || || || | ||| | ||| | || | || ||||| || Sbjct 4087 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAA 4037 >seq20122 Length=23100 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| |||||| | ||| ||| | Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || || ||| ||| || ||||||||| | || |||||| Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 11195 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| |||| || || || ||| | ||||||| || || | || ||||| Sbjct 11194 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 11135 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || || || ||||||||| | ||| | || ||| | | |||| |||| Sbjct 11134 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 11086 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || || || || || || || || || || | ||| ||| | Sbjct 11771 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 11712 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| |||||||| || | ||| ||||| Sbjct 11711 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 11652 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || |||||||| ||| | || || | ||||| Sbjct 11651 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTAC 11594 Query 115463 AACATTCAAAAAGAGTCTACT 115483 |||||||| ||||| |||||| Sbjct 11593 AACATTCAGAAAGAATCTACT 11573 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| ||||| | ||| ||| | Sbjct 10630 ATGCAAATTTTTGTAAAAACACTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 10571 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| ||||||| ||||| || || | || || || Sbjct 10570 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCTCCAGACCAA 10511 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||||| || || |||||| | ||||||| || || | || || ||| Sbjct 10510 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAAC 10451 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 ||||| || || |||||| ||||| Sbjct 10450 ATTCAGAAGGAATCTACTTTACAT 10427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || ||||| || || | ||| ||| | Sbjct 10859 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 10800 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || ||||||| |||||||| ||| | || || || Sbjct 10799 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCA 10740 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || || |||| ||| |||||||| ||||||||| || || | || ||||| Sbjct 10739 ACAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 10680 Query 115465 CATTCAAAAAGAGTCTACT 115483 |||||||| || |||||| Sbjct 10679 TATTCAAAAGGAATCTACT 10661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424493688163600