Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201
5-12-17] 164,030 sequences; 282,526,854 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq20122 154 1e-32
seq22953 145 7e-30
seq19342 134 1e-26
seq27375 91.5 1e-13
>seq20122
Length=23100
Score = 154 bits (170), Expect = 1e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | ||
Sbjct 10859 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 10800
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | ||| |||||| ||| || ||||| || ||||| || ||||
Sbjct 10799 TGATACAATTGAAAATGTTAAGGCAAAAATTCAG-GATAAAGAGGGCATTCCTCCAGACC 10741
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||| || | |||||||| |||||||| ||||||||| |||||| || || || |
Sbjct 10740 AACAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATA 10681
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||||| ||||| || | || ||||| || | |||||||| ||
Sbjct 10680 ATATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCGTCTAAGAGGTGG 10632
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||||||||||||||| || |||| || || | |||||| | ||||| ||| | ||
Sbjct 11543 AATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 11484
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||| || || | ||| | |||| ||| || || ||||| ||||| || ||||
Sbjct 11483 TGACACAATTGAAAATGTTAAGGCCAAAATTCAA-GATAAGGAAGGAATTCCTCCAGACC 11425
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || |||||||||| || || || | ||||||| || || || || ||||
Sbjct 11424 AACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACA 11365
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||| || ||||| || |||||||||| || | || ||||| ||
Sbjct 11364 ATATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 11316
Score = 120 bits (132), Expect = 3e-22
Identities = 168/233 (72%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | ||
Sbjct 11087 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 11028
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||| || || || | || |||| |||| ||| ||||| ||||| ||||| || ||
Sbjct 11027 TGATACAAT--AGAAAATGTTAAAGCTAAAATTCA-AGACAAGGAAGGTATTCCTCCAGA 10971
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| | | ||||| || || || ||| | ||||||| |||||| || || ||
Sbjct 10970 TCAACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGTCGCACATTGTCAGACTA 10911
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||| || || || || || | |||||||| | | |||||||| ||||
Sbjct 10910 TAATATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 10858
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || ||||| || ||| | || || | ||||| || | |||
Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| |||||||| | ||| |||| | ||| ||||| ||||| ||||| || || ||
Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGATTCAA-GACAAGGAAGGCATTCCTCCAGATCA 10284
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||||||||| || ||| | ||||||| ||||| || || || ||
Sbjct 10283 ACAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 10224
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| || |||||||| || || || | || || || || ||||| ||
Sbjct 10223 TATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGG 10176
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || |||| || ||| | || || | |||||||| | |||
Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | ||| |||| | ||| ||||||||||| ||||| ||||| ||
Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGATTCAG-GACAAAGAAGGCATTCCTCCTGATCA 11196
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||| || || || ||| | ||||||| ||||| || || || ||
Sbjct 11195 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 11136
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||| || || || || || | |||||||| | | |||||||| ||||
Sbjct 11135 TATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 11086
>seq22953
Length=36863
Score = 145 bits (160), Expect = 7e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| |||||| | || || ||| ||||||| | || || || ||||
Sbjct 14226 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 14167
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| ||| ||| |||||||| || ||||| || || ||
Sbjct 14166 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 14107
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | |||||||| || |||||| | ||||||| || || | ||||| ||
Sbjct 14106 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 14047
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||||| ||||| || |||||||||||
Sbjct 14046 TATTCAAAAGGAATCTACCCTACATTTAGT 14017
Score = 141 bits (156), Expect = 8e-29
Identities = 162/215 (75%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| || || ||||| || || |||| || | ||||| || | |||
Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || ||| | || |||| |||| || || || || || || || || |||
Sbjct 13481 GACACAATTGAG--AATGTCAAAGCTAAAATACAG-GATAAGGAGGGCATCCCCCCAGAC 13425
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | |||||||| || |||||||| ||||| | ||||||| || ||||||
Sbjct 13424 CAACAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTAC 13365
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| ||||| || || || || ||||||||
Sbjct 13364 AATATTCAGAAAGAGTCAACCCTGCACTTAGTGCT 13330
Score = 125 bits (138), Expect = 6e-24
Identities = 157/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || || | || || | ||||||||| | |||
Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGAGCCATCT 13710
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | || || || | ||| || ||||| || ||||| || || ||
Sbjct 13709 GACACCATTGAAAATGTAAAGGCTAAGATTCA-AGATAAAGAGGGTATTCCCCCAGATCA 13651
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| ||||| |||||||| ||||||||| |||||| || || |||||
Sbjct 13650 ACAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 13591
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| |||||||| || || || |||||||| ||
Sbjct 13590 CATCCAAAAAGAGTCTACTCTTCATTTAGTACT 13558
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | || || || ||||||| | || |||||| | |||
Sbjct 12857 ATGCAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCT 12798
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| ||||| || || ||||| || ||||||
Sbjct 12797 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 12738
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || ||||| || || |||| |||||| || || || ||
Sbjct 12737 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAAC 12678
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||||||||| || | |||||||| ||
Sbjct 12677 ATCCAAAAAGAATCTACTTTGCATTTAGTACT 12646
Score = 114 bits (126), Expect = 1e-20
Identities = 155/213 (73%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || | || |||||| |||| || | ||||| || | ||
Sbjct 14454 AATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 14395
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| ||||| || | || |||| |||| ||| ||||| ||||| ||||| || ||
Sbjct 14394 CGATACTATTGAA--AATGTAAAAGCCAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 14338
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | ||||| || || || ||||||||||| | |||||| | ||| ||
Sbjct 14337 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTA 14278
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||||||||||||| || || || || ||
Sbjct 14277 TAATATTCAAAAAGAATCTACTCTTCACTTGGT 14245
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||||||||| |||| || ||| | |||||| | ||||| || | ||
Sbjct 13085 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 13026
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || | || |||| || | || |||||||| || ||||| || ||
Sbjct 13025 GACACTATTGAA--AATGTTAAAGCCAAGATCCAA-GACAAAGAGGGTATTCCCCCAGAT 12969
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | ||||| || ||||| || | || |||| || ||| | || |||
Sbjct 12968 CAACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTAC 12909
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| ||||| ||||| | || || || || | || |||||||
Sbjct 12908 AATATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 12859
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| || || | || || ||| | || || | ||||| ||| | ||
Sbjct 13314 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 13255
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || | || |||| || | ||| || || ||||| ||||| || ||
Sbjct 13254 AGACACCATTGA--AAATGTTAAAGCCAAGATTCA-AGATAAGGAAGGAATTCCTCCAGA 13198
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || |||| || || || || ||| | ||||||| ||||| || || ||
Sbjct 13197 TCAACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTA 13138
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||| || ||||| ||||| || || || || || | || |||||||
Sbjct 13137 CAATATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 13087
>seq19342
Length=14378
Score = 134 bits (148), Expect = 1e-26
Identities = 176/241 (73%), Gaps = 6/241 (2%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| || || ||||| | || |||||| |||| || |||| |||||| |
Sbjct 4269 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 4210
Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
||||| ||||| || | || |||| |||||| || || ||||| ||||||||
Sbjct 4209 TCTGATACTAT--AGAAAATGTAAAAGC-TAAAATCCAAGATAAGGAAGGTATTCCACCA 4153
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
||||| || || | || ||||| || |||||| ||||||||| || || || ||
Sbjct 4152 GACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGAC 4093
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTAT 25232
||||| |||||||| |||||||| | ||| | ||||| | || | ||||| || |||
Sbjct 4092 TACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTAT 4033
Query 25233 T 25233
|
Sbjct 4032 T 4032
>seq27375
Length=13220
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/197 (72%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149
||| |||||| || ||||| | || || || ||||||||||| || | | || ||
Sbjct 99 ACCAACATAACCATTGGGATCTCTGCCGTCAACACTGTAATGATCATTCAAGTAAATAGC 158
Query 51150 ATAACCCAATGCCATGTCTGCACTAG-GCGTCCATTCCATAATTTTCTTGGCCCAGTACA 51208
| | ||| ||| ||| | | | | |||||||| | ||| |||||| ||||||||
Sbjct 159 AAACTTCAAAGCC-TGTTCGGGCGACTGGGTCCATTCTAAAATCTTCTTGCACCAGTACA 217
Query 51209 TGCGCATGTAACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCA 51266
|||| | | |||| |||||||||||||| || | || || |||||| ||||||||
Sbjct 218 TGCGTAGGAAACCATGCATCTTGCCCTCTTTCACC--AGTTGTATTTGAGCTGAGTTCCA 275
Query 51267 CAATTCGTCGTGAGTTT 51283
|| || ||||| ||||
Sbjct 276 TAAGTCATCGTGTGTTT 292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432461727224450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |