Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq20122 154 1e-32 seq22953 145 7e-30 seq19342 134 1e-26 seq27375 91.5 1e-13 >seq20122 Length=23100 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | || Sbjct 10859 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 10800 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | ||| |||||| ||| || ||||| || ||||| || |||| Sbjct 10799 TGATACAATTGAAAATGTTAAGGCAAAAATTCAG-GATAAAGAGGGCATTCCTCCAGACC 10741 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| || | |||||||| |||||||| ||||||||| |||||| || || || | Sbjct 10740 AACAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATA 10681 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||| ||||| || | || ||||| || | |||||||| || Sbjct 10680 ATATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCGTCTAAGAGGTGG 10632 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||||||||||||||| || |||| || || | |||||| | ||||| ||| | || Sbjct 11543 AATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 11484 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| || || | ||| | |||| ||| || || ||||| ||||| || |||| Sbjct 11483 TGACACAATTGAAAATGTTAAGGCCAAAATTCAA-GATAAGGAAGGAATTCCTCCAGACC 11425 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || |||||||||| || || || | ||||||| || || || || |||| Sbjct 11424 AACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACA 11365 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||| || ||||| || |||||||||| || | || ||||| || Sbjct 11364 ATATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 11316 Score = 120 bits (132), Expect = 3e-22 Identities = 168/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | || Sbjct 11087 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 11028 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| || || || | || |||| |||| ||| ||||| ||||| ||||| || || Sbjct 11027 TGATACAAT--AGAAAATGTTAAAGCTAAAATTCA-AGACAAGGAAGGTATTCCTCCAGA 10971 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| | | ||||| || || || ||| | ||||||| |||||| || || || Sbjct 10970 TCAACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGTCGCACATTGTCAGACTA 10911 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||| || || || || || | |||||||| | | |||||||| |||| Sbjct 10910 TAATATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 10858 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || ||||| || ||| | || || | ||||| || | ||| Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || |||||||| | ||| |||| | ||| ||||| ||||| ||||| || || || Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGATTCAA-GACAAGGAAGGCATTCCTCCAGATCA 10284 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||||||||| || ||| | ||||||| ||||| || || || || Sbjct 10283 ACAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 10224 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || |||||||| || || || | || || || || ||||| || Sbjct 10223 TATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGG 10176 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || |||| || ||| | || || | |||||||| | ||| Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| |||| | ||| ||||||||||| ||||| ||||| || Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGATTCAG-GACAAAGAAGGCATTCCTCCTGATCA 11196 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||| || || || ||| | ||||||| ||||| || || || || Sbjct 11195 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 11136 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||| || || || || || | |||||||| | | |||||||| |||| Sbjct 11135 TATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 11086 >seq22953 Length=36863 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| |||||| | || || ||| ||||||| | || || || |||| Sbjct 14226 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 14167 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| ||||| ||| ||| |||||||| || ||||| || || || Sbjct 14166 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 14107 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | |||||||| || |||||| | ||||||| || || | ||||| || Sbjct 14106 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 14047 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||||| ||||| || ||||||||||| Sbjct 14046 TATTCAAAAGGAATCTACCCTACATTTAGT 14017 Score = 141 bits (156), Expect = 8e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || || ||||| || || |||| || | ||||| || | ||| Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| || || || || || || || || ||| Sbjct 13481 GACACAATTGAG--AATGTCAAAGCTAAAATACAG-GATAAGGAGGGCATCCCCCCAGAC 13425 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | |||||||| || |||||||| ||||| | ||||||| || |||||| Sbjct 13424 CAACAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTAC 13365 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| || || || || |||||||| Sbjct 13364 AATATTCAGAAAGAGTCAACCCTGCACTTAGTGCT 13330 Score = 125 bits (138), Expect = 6e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | || || || | || || | ||||||||| | ||| Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGAGCCATCT 13710 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || || || | ||| || ||||| || ||||| || || || Sbjct 13709 GACACCATTGAAAATGTAAAGGCTAAGATTCA-AGATAAAGAGGGTATTCCCCCAGATCA 13651 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| ||||| |||||||| ||||||||| |||||| || || ||||| Sbjct 13650 ACAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 13591 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| || || || |||||||| || Sbjct 13590 CATCCAAAAAGAGTCTACTCTTCATTTAGTACT 13558 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || ||||||| | || |||||| | ||| Sbjct 12857 ATGCAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCT 12798 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| || || ||||| || |||||| Sbjct 12797 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 12738 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || ||||| || || |||| |||||| || || || || Sbjct 12737 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAAC 12678 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||||||||| || | |||||||| || Sbjct 12677 ATCCAAAAAGAATCTACTTTGCATTTAGTACT 12646 Score = 114 bits (126), Expect = 1e-20 Identities = 155/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || || | || |||||| |||| || | ||||| || | || Sbjct 14454 AATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 14395 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||| || | || |||| |||| ||| ||||| ||||| ||||| || || Sbjct 14394 CGATACTATTGAA--AATGTAAAAGCCAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 14338 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | ||||| || || || ||||||||||| | |||||| | ||| || Sbjct 14337 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTA 14278 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||||||||||||| || || || || || Sbjct 14277 TAATATTCAAAAAGAATCTACTCTTCACTTGGT 14245 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| |||| || ||| | |||||| | ||||| || | || Sbjct 13085 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 13026 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || | || |||| || | || |||||||| || ||||| || || Sbjct 13025 GACACTATTGAA--AATGTTAAAGCCAAGATCCAA-GACAAAGAGGGTATTCCCCCAGAT 12969 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | ||||| || ||||| || | || |||| || ||| | || ||| Sbjct 12968 CAACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTAC 12909 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| ||||| | || || || || | || ||||||| Sbjct 12908 AATATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 12859 Score = 102 bits (112), Expect = 7e-17 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| || || | || || ||| | || || | ||||| ||| | || Sbjct 13314 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 13255 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || | || |||| || | ||| || || ||||| ||||| || || Sbjct 13254 AGACACCATTGA--AAATGTTAAAGCCAAGATTCA-AGATAAGGAAGGAATTCCTCCAGA 13198 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || |||| || || || || ||| | ||||||| ||||| || || || Sbjct 13197 TCAACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTA 13138 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| || ||||| ||||| || || || || || | || ||||||| Sbjct 13137 CAATATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 13087 >seq19342 Length=14378 Score = 134 bits (148), Expect = 1e-26 Identities = 176/241 (73%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| || || ||||| | || |||||| |||| || |||| |||||| | Sbjct 4269 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 4210 Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 ||||| ||||| || | || |||| |||||| || || ||||| |||||||| Sbjct 4209 TCTGATACTAT--AGAAAATGTAAAAGC-TAAAATCCAAGATAAGGAAGGTATTCCACCA 4153 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 ||||| || || | || ||||| || |||||| ||||||||| || || || || Sbjct 4152 GACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGAC 4093 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTAT 25232 ||||| |||||||| |||||||| | ||| | ||||| | || | ||||| || ||| Sbjct 4092 TACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTAT 4033 Query 25233 T 25233 | Sbjct 4032 T 4032 >seq27375 Length=13220 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149 ||| |||||| || ||||| | || || || ||||||||||| || | | || || Sbjct 99 ACCAACATAACCATTGGGATCTCTGCCGTCAACACTGTAATGATCATTCAAGTAAATAGC 158 Query 51150 ATAACCCAATGCCATGTCTGCACTAG-GCGTCCATTCCATAATTTTCTTGGCCCAGTACA 51208 | | ||| ||| ||| | | | | |||||||| | ||| |||||| |||||||| Sbjct 159 AAACTTCAAAGCC-TGTTCGGGCGACTGGGTCCATTCTAAAATCTTCTTGCACCAGTACA 217 Query 51209 TGCGCATGTAACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCA 51266 |||| | | |||| |||||||||||||| || | || || |||||| |||||||| Sbjct 218 TGCGTAGGAAACCATGCATCTTGCCCTCTTTCACC--AGTTGTATTTGAGCTGAGTTCCA 275 Query 51267 CAATTCGTCGTGAGTTT 51283 || || ||||| |||| Sbjct 276 TAAGTCATCGTGTGTTT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432461727224450