Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq20852 255 6e-63 seq66326 113 5e-20 >seq20852 Length=11699 Score = 255 bits (282), Expect = 6e-63 Identities = 783/1200 (65%), Gaps = 23/1200 (2%) Strand=Plus/Minus Query 51249 CCCAGGCCCTCGTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCACGCA 51308 || || ||| || |||||| ||||||||||| ||||| |||||||| | |||||| ||| Sbjct 3362 CCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCA 3303 Query 51309 AACAATCCCGCCAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACGGATCGAGCG 51368 || | || | | | ||| || || | ||||| | |||||||| ||| Sbjct 3302 AAGAGACCTCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACGGATCTAGCA 3243 Query 51369 TTGTCGAACGTGATCAGGTTGCCCGC-GATCGGTTCGAAGCCGTACGCAGCCTCGGCGAT 51427 || || | || | || | || | ||| ||| ||| |||| | || | ||||| Sbjct 3242 TTATCATAGGTTACAAGATCTCCAGTTGAT-GGTCTGAAAACGTAGGGGGCTTGGGCGAC 3184 Query 51428 CAGATCGTAGTAGAACTCGTAGT--CTTTGACGAACT-CGTTCGCGATCTGCCGATAGTC 51484 ||||| | |||||| | | | |||| || | | ||||| |||| || ||||| Sbjct 3183 ATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCCCTGTAGTC 3124 Query 51485 GACCACCCCATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACCAGTT 51544 ||||| || | || ||| || |||| || ||||| ||| ||| |||| | Sbjct 3123 AACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAAT 3064 Query 51545 CGGTTCGTAGTCGTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCCGAC 51604 ||| || | ||| | ||| | ||| || ||| | ||||| || || || || Sbjct 3063 --GTT-GTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTAC 3007 Query 51605 GACGATCTTCT---GATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTCGGT 51661 || ||||||| |||| ||| ||||| | || | | || | |||| | Sbjct 3006 TACAATCTTCTTAGGATT---CACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGA 2950 Query 51662 GGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAGATC 51721 ||||| |||| | ||| ||||| |||||| ||| || || || | || ||| Sbjct 2949 TGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGT 2890 Query 51722 GGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTGCGT 51781 || ||||| || |||||||| ||||| |||| | |||||| | ||||| | | Sbjct 2889 ATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATT 2830 Query 51782 CTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCTGGT 51841 || ||| ||||||| || ||||| |||||||| | || ||||| || || || Sbjct 2829 TTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGT 2770 Query 51842 CAACAGGTA---CGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAGCTC 51898 || ||| | || ||| | || | | | ||| |||||||| || || | || Sbjct 2769 TAATTCGTATTTCTTACCATTCTTAGCTGAG---AGCTCATCGAGCATCTCACGTAATTC 2713 Query 51899 GGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCAGGTCGGGATTGGC 51958 ||| | | || || ||||||| || || || ||||| || || || Sbjct 2712 TTTCATCAAACTTACATAACAATCACCATCT---TCTGGGCTACCGAGGTCAGGGTTAGC 2656 Query 51959 GCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAGTCAG 52018 |||||||| || || |||||||| |||| || || || |||||||| ||||| || || Sbjct 2655 ACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAG 2596 Query 52019 CAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGTCGTGCAGGAAGAA 52078 || ||||| || || | || || || | || ||| | ||||| Sbjct 2595 AAGGAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAA 2536 Query 52079 GAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGATTGGC 52138 ||| ||||||| |||||||| || || || || || |||||||| | ||| ||| Sbjct 2535 GAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGC 2476 Query 52139 CCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCGAGAC 52198 |||| | ||| | || |||||||| || ||||| || |||||||| | || | Sbjct 2475 TTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAA 2416 Query 52199 GCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCCGA 52258 ||||| || ||||| || | || ||||| |||||||| || | || ||||||||| Sbjct 2415 TCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTC 2356 Query 52259 CCTGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTC 52318 | ||| || ||||| || | |||| ||||||| |||||| ||| | || || Sbjct 2355 ACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATC 2296 Query 52319 GTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTTCGG 52378 ||||||||||| || ||||| || ||||| |||||||| |||| ||| | || || || Sbjct 2295 ATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGG 2236 Query 52379 CAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTAGGC 52438 | || | |||| ||||| || || | || || |||||||| || |||||||| Sbjct 2235 TATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGC 2176 >seq66326 Length=6876 Score = 113 bits (124), Expect = 5e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38443 ACTGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATT 38502 ||||||| || |||||||||| ||| | | | ||||| || || |||| ||| Sbjct 5466 ACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTCTACA 5407 Query 38503 CGGGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGC 38562 | ||| || ||| | || || |||| || | |||||| || |||||||||||| Sbjct 5406 CCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGACTGGGAGA 5347 Query 38563 CTGCGGACGATCCGTGGGCGCAGCACGCGCGCTGGTTCGACAGGTGCGCTTACGTGCTCA 38622 | |||| ||||||| |||||||||||||||||||||| ||||||| ||||||| Sbjct 5346 ACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGCAGC 5287 Query 38623 CCGTCAAAGGCGCCGACTACGTTCA 38647 ||||||||| || ||||| || Sbjct 5286 TGGTCAAAGGCCGAGAGTACGTCCA 5262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536500911838800