Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq20852 224 7e-54 seq20122 132 3e-26 seq22953 107 1e-18 >seq20852 Length=11699 Score = 224 bits (248), Expect = 7e-54 Identities = 413/596 (69%), Gaps = 27/596 (5%) Strand=Plus/Minus Query 84237 GGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTC 84296 ||||| || |||||||| || || || ||||||||||| || ||||| ||||| |||||| Sbjct 2663 GGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTC 2604 Query 84297 CATACTTGTAAAAACTCCTTAACCGAATTTACAAAAACGT-TTCTTTTTTCAACATTGTG 84355 ||| | | | |||||||| || || | ||||| ||| |||| || | ||| || Sbjct 2603 CATGTTAGAAGGAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTT----AGATT-TG 2550 Query 84356 CATGAAATAAAACG------GGTCCGACAA-CGTCCATCCTCCTATGGACGGAAGAATCT 84408 | || ||||| | || || ||| |||||| || || || || |||||||||| Sbjct 2549 --TCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCT 2492 Query 84409 TTAGGT----GCGGGTTCGCCAATTTAGCTGCCATCAATTGTCCAAAATTGCCTTTATAC 84464 | | | ||||| | | ||||| || ||| ||||| ||||| |||||||| || Sbjct 2491 TCAATTCAGGGCGGGCTTGT---TTTAG-TGACATTAATTGGCCAAAGTTGCCTTTGTAG 2436 Query 84465 GGTTCGTTCCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGG 84524 || |||||||| | |||| || ||||| || ||||||| || ||||| ||||||||| Sbjct 2435 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 2376 Query 84525 ATGGCAATTTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCG 84584 || | | |||||| ||| |||| || || || || || || || | || |||||| || Sbjct 2375 ATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 2316 Query 84585 GGTATCACTTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTAC 84644 ||| |||| | | ||| || || || | |||||||||||| || || || ||||| Sbjct 2315 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 2256 Query 84645 AACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACACT 84704 | ||| || | | ||| || | || | || ||||| || || | || || Sbjct 2255 AGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACA 2196 Query 84705 CCCCATTCAACAAAATACGCAGCAACCGTTTTATCGTCTCTT---CTGCCCGGTTTGTTG 84761 |||||||| || || || ||| | || ||| | | || || ||| || || Sbjct 2195 CCCCATTCTACGAAGTAGGCACCCACAACTTTTCCAGATGTTTGCTTGAACGGCTTATTT 2136 Query 84762 TTTTCCCGCCATGTATATTCCAGCGGAGCCAAATGACCGCCGTCGGTGTCTGCCAC 84817 ||||| | | |||||||||| || |||| ||||||| || ||||| || ||||| Sbjct 2135 TTTTCTCCCAATGTATATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGCCAC 2080 >seq20122 Length=23100 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| | || ||| | || || ||||| || || ||||| |||||| | Sbjct 10859 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 10800 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| ||||||| ||||||||||| | ||| | |||| Sbjct 10799 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCA 10740 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| || || |||||||||||||| ||||||||| | ||| || | || || || Sbjct 10739 ACAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 10680 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||| |||||||||||| | || | || | ||| || |||| || Sbjct 10679 TATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCGTCTAAGAGGTGG 10632 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||||||| | |||||| | || ||||| || || || ||||| || || | Sbjct 11543 AATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 11484 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| |||||| ||||| || || | ||| | |||| Sbjct 11483 TGACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCA 11424 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| || ||||| |||||||| || || || |||||| | || || | || ||||| Sbjct 11423 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACAA 11364 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||||||||||| | ||| | ||| | ||| | |||| || Sbjct 11363 TATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 11316 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | |||||| | || || ||||| ||||| | ||| || | | Sbjct 10630 ATGCAAATTTTTGTAAAAACACTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 10571 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || |||| ||||||| ||||| ||||| | ||| | ||||| Sbjct 10570 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCTCCAGACCAA 10511 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| ||||| || ||||| |||||||| |||||| | || || | || ||||| Sbjct 10510 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAAC 10451 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||||||| | ||| | ||| | ||| | |||| || Sbjct 10450 ATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 10404 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || | || ||| | || ||||| || || || ||||| || | | Sbjct 11771 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 11712 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || |||| |||||| ||||||||||| | || | | || Sbjct 11711 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 11652 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTA--AAAACTATGGCCGATTAC 22010 || |||||||| |||||||| || || ||||||||| | | ||||| | |||||| Sbjct 11651 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTAC 11594 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || |||||||| ||||||||| | || | ||| |||| | |||| ||| Sbjct 11593 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 11543 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| ||||| || ||||| || || ||||| |||||| | Sbjct 11998 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTGGAAGCTTCT 11939 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||| ||| ||| || || || || | ||| | | ||| Sbjct 11938 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 11879 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||||| || || || || || ||||| |||||| || || | || || ||| Sbjct 11878 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCAGACTATAAT 11819 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||||||||||||| | || | || || ||| |||| || ||| Sbjct 11818 ATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTACGGGGTGGA 11771 >seq22953 Length=36863 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | || ||| |||| ||||| || || || ||||| ||| | | Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGAGCCATCT 13710 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| |||||||||||| | || | | ||| Sbjct 13709 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 13650 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | |||||||||||||||||||| ||||||||| || || | || ||||| Sbjct 13649 CAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 13590 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || || |||||||||||| | ||| | ||| | ||||| || Sbjct 13589 ATCCAAAAAGAGTCTACTCTTCATTTAGTACTGCGTCTGCGAGGTGG 13543 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || ||| | |||||| | ||||| ||||||||||| ||||| ||| | Sbjct 14457 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 14398 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || || | | || | || |||||| || || || || | ||| | | Sbjct 14397 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 14338 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||||| | | || || ||||| || ||| ||||||| | ||| | |||| || Sbjct 14337 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTA 14278 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 |||||||| || |||||||||||||| ||||||| ||| | || || ||| Sbjct 14277 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGA 14226 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||||||| | |||||| | || || ||||| || || ||||| || | | Sbjct 13314 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 13255 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || |||| || ||| ||||| || || | ||| | | || Sbjct 13254 AGACACCATTGAAAATGTTAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 13195 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| | |||||||| ||||| || ||||| |||||| || || | || ||||| Sbjct 13194 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACAA 13135 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||| || || || ||||| ||||| | ||| | |||||||| Sbjct 13134 TATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 13087 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||||||| | |||||||| || || || ||||||||| ||||| ||| | | Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || ||||| ||||| ||||| | || | ||||| Sbjct 13481 GACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 13422 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||| | || || |||||||| |||||| | ||||| ||| || | ||||||||| Sbjct 13421 CAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAAT 13362 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 |||||||| || || || || || Sbjct 13361 ATTCAGAAAGAGTCAACCCTGCA 13339 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || ||| | || || ||||| || || | ||| ||| || || Sbjct 13085 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 13026 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || |||| || || || ||||||||| | || | | ||| Sbjct 13025 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 12966 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || || || |||||||| || || || ||| ||| | | || |||||| Sbjct 12965 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 12906 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| || || ||| | || |||||||||||||||||||||| Sbjct 12905 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 12859 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| |||| || | || || |||||||| || | || ||| | | Sbjct 14226 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 14167 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || | ||| ||| || || ||||||||| | || | | || Sbjct 14166 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 14107 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| || || |||||||| |||||||| |||||| || | | ||||| || Sbjct 14106 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 14047 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 |||||| ||||||||||| || ||| | ||||| || Sbjct 14046 TATTCAAAAGGAATCTACCCTACATTTAGTATTGCG 14011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357408867116620