Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq22953 152 1e-31 seq19342 145 2e-29 seq20122 125 2e-23 >seq22953 Length=36863 Score = 152 bits (168), Expect = 1e-31 Identities = 178/239 (74%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | | ||| | |||| || ||||||||| ||||||||||||| Sbjct 14226 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGA 14285 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 || |||||||||||||||||||| ||||| ||||| |||| ||| ||||| |||| Sbjct 14286 AAGAGTGCGTCCGTCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTG---ATCTGG 14342 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || ||||| || || || ||||| ||||| || ||||| |||| |||| | ||| Sbjct 14343 AGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTC 14402 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481 ||||| | || || || || || || || || || || || ||||||||| || ||| Sbjct 14403 AACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGATAT 14461 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | |||||| | ||| | || |||||||||||| |||||||| | Sbjct 12631 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 12690 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || ||||| || || ||||| ||||||||||| |||||| Sbjct 12691 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTG---GTCTGGG 12747 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || || || || ||||| |||| || | || Sbjct 12748 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCC 12807 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| |||||||| || |||||||| ||||| |||||||| Sbjct 12808 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 12857 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || | || | || ||||| || ||||| || || | Sbjct 13314 TCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGA 13373 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 | ||||| |||||||| ||||||||||| || || || ||||||||||| ||| Sbjct 13374 CAAAGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAAATGAGACGCTGTTG---GTCTGG 13430 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || || |||||||| ||||| ||||| || || || || | || | ||| Sbjct 13431 GGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTC 13490 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||| || || || ||||| || |||| || ||||| ||||| ||||| Sbjct 13491 TACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 13541 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||||| | ||||| || ||||||||||| || ||||| | Sbjct 13543 CCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 13602 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||||| ||||| || || ||||| ||||| ||||| ||||||| Sbjct 13603 AGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTG---ATCTGGG 13659 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || |||||||| || || || || || || ||||| || | || | || Sbjct 13660 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 13719 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || ||||| || || || |||||||| ||||| ||||| Sbjct 13720 ACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 13769 >seq19342 Length=14378 Score = 145 bits (160), Expect = 2e-29 Identities = 178/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| |||| ||| || ||||| | ||| ||| ||||| || || ||||| | Sbjct 4040 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 4099 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||||| |||||| || || ||||||| ||| || || ||| Sbjct 4100 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 4159 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| |||||||| ||||| || |||||||||| ||| | || || Sbjct 4160 ATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACC 4219 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCTAA 288486 ||||| || || || || || || || ||||||||||| || |||||| || | | ||| Sbjct 4220 TCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGAGACTGTAA 4279 Query 288487 TAT 288489 ||| Sbjct 4280 TAT 4282 >seq20122 Length=23100 Score = 125 bits (138), Expect = 2e-23 Identities = 146/196 (74%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||||||||| | || |||||||| ||||||| ||||| || || || Sbjct 10667 TTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAA 10726 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | |||||| ||| || || || ||||||||||| ||||| || || || Sbjct 10727 AATCAGCCTCTGTTG---GTCTGGAGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAAC 10783 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| | ||| ||||| | ||||| || ||||| ||||| ||||| Sbjct 10784 ATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTT 10843 Query 288459 GACGAATATCTGCATT 288474 || || || |||||| Sbjct 10844 TACAAAAATTTGCATT 10859 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || | ||||| || || | || |||||| || || || || || | Sbjct 11543 TCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGA 11602 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || |||||||| ||||||| || ||||| || || || || | || ||| ||||| Sbjct 11603 TAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGA---TCTGG 11659 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||| ||||||||||| ||||||||||| || ||||| || | ||| | || Sbjct 11660 GGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTC 11719 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | ||||| ||||| || ||||| ||||| ||||| || |||||| Sbjct 11720 AACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 11771 Score = 118 bits (130), Expect = 2e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||||||||| | | ||||| || ||||| | ||| ||||| ||||| Sbjct 10896 TCCTTCTGGATATTATAGTCTGACAATGTGCGACCATCTTCCAGTTGCTTTCCAGCGAAA 10955 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||||| |||| || || ||||| || || || ||||| ||||| || Sbjct 10956 ATCAGTCTTTGTTG---ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACA 11012 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 |||||||| | ||| | ||| ||||| | ||||| || ||||| ||||| ||||| Sbjct 11013 TTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTT 11072 Query 288460 ACGAATATCTGCATT 288474 || || || |||||| Sbjct 11073 ACAAAAATTTGCATT 11087 Score = 113 bits (124), Expect = 1e-19 Identities = 145/199 (73%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||||||||| | || ||||| || ||||| | ||| ||||| ||||| Sbjct 11807 TTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAA 11866 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||||| |||| || || ||||| || || || || || || || || Sbjct 11867 AATCAGTCTTTGTTG---ATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTAC 11923 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||| || | ||| | ||| ||||| | ||||| || ||||| || | ||| || Sbjct 11924 GTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTCCCAGTTAAAGTTTT 11983 Query 288459 GACGAATATCTGCATTATG 288477 ||||| || ||||| ||| Sbjct 11984 TACGAAGATTTGCATGATG 12002 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| || || || |||| || |||||| |||||||||||||| | Sbjct 10176 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAC 10235 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | ||||| || ||||| | ||| ||||| || || ||||| | ||||| |||| Sbjct 10236 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCAAAAATCAGTCTTTGTTG---ATCTGGA 10292 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || ||||| || || || || || || || || ||||| |||| ||| | |||| Sbjct 10293 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATAGTATCAGAAGCTTCT 10352 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || || || || |||| || || || || || ||||| Sbjct 10353 ACTTCCAAAGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 10402 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||||||||| | | ||||| || ||||| | ||| ||||| ||||| Sbjct 11124 TCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAA 11183 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | |||||| | || || |||||||| ||||| || || || || || ||| Sbjct 11184 ATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTAACATTT 11243 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | ||| ||||| | || || || || || ||||| || || || Sbjct 11244 TCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACA 11303 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 11304 AAAATTTGCAT 11314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177175197762340