Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20852 188 7e-43 seq20122 116 4e-21 seq22953 111 2e-19 seq19342 111 2e-19 >seq20852 Length=11699 Score = 188 bits (208), Expect = 7e-43 Identities = 457/679 (67%), Gaps = 16/679 (2%) Strand=Plus/Plus Query 27833 AAAGGCGGCAAGTTCGACATGACAGTGAAGCTGTGCAACGTCGACGGCTGTTCGACAAGT 27892 ||||| || | | | | ||||||||| | || ||||| | ||||||||| ||||| Sbjct 2002 AAAGGTGGAAGATACCAAATGACAGTGGAACTTTGCAATGACGACGGCTGCAGTTCAAGT 2061 Query 27893 -AGCGCGGTCAAAGTGATCGTCGCCGACACCGACGGTTCTCATCTCGCGCCGCTAGTATA 27951 | | | ||| || |||| ||||| ||||| || |||| | | || |||| ||| Sbjct 2062 GATCCCACCGAAATTG-TCGTGGCCGATACCGATGGAAGTCATTTACCTCCTCTAGAATA 2120 Query 27952 CGATTTCCTCGAAAACAACAAGCGCTTTGAT-AAACATCCCGAGAAAATTGTGGCCGCCT 28010 || ||||| || |||| || | ||||||| || ||| |||||| |||| Sbjct 2121 TACATTGGGAGAAAAAAATAAGCCGTTCAAGCAAACATCTGGA-AAAGTTGTGGGTGCCT 2179 Query 28011 ATTTCGTCGAGTGGGGCGTGTATCTGCGGCAGTTTCCCGTCGACAAAGTGCCCGCGCCCA 28070 | ||||| || ||||| || |||| || | || ||||| || | || || | Sbjct 2180 ACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATACCTA 2239 Query 28071 ACCTGTCGCACTTGCTGTACGGTTTCGTGCCGATATGCGGCGGCGACGGCATAAACGACG 28130 | || | || ||||| ||||| || | || || |||||||| |||||||| || || Sbjct 2240 ATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAATGATA 2299 Query 28131 CCCTCAAGACCGTTCCC-GGCAGTTTCGAGGCGCTGCAGCGCTCGTGCGCCGGGCGCGCC 28189 | || | | || ||||||||| | || || ||||| || || ||| || | Sbjct 2300 GTTTAAA-AGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGAG 2358 Query 28190 GACTTCAAGGTGACGATCCACGATCCCTGGGCCGCCATTCAGAAGCCGCAAAAGGGCGTC 28249 ||||| || || | ||||||||||| ||||| || | || || || ||||| || | Sbjct 2359 GACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTG 2418 Query 28250 TCTACGTGGAACGAGCCGTACAAAGGCAACTTTGGGCAATTGATGAGCGTCAAATTAGCC 28309 ||| | ||||||||||| ||||||||||||||||| ||||| ||| | ||| |||| Sbjct 2419 TCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCC 2478 Query 28310 AATCCGCACTTGAAGGTGCTGGCGTCGATCGGCGGCTGGACGCTGTCGGACCCATTC--- 28366 || | |||||| | || | || || || || |||||||| | || || ||| Sbjct 2479 CGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTTCTTC 2538 Query 28367 -TTTCACATGCACGACGCGACCGTGCGCCAAACG-TTCATCGATTCCGTCGTGGACTTTC 28424 ||| | || || | | | | | | ||| || | | || || ||| || | Sbjct 2539 TTTTTAGTTG-ACAAATCTA-AGAG---AACACGATTTGTGCAGTCAGTAAAGGAGTTCC 2593 Query 28425 TGCTGACCTGGAAGTTCTTCGACGGCGTCGACATCGATTGGGAGTTTCCGGGCGGCAAAG 28484 | || || ||||| |||||||| || || || |||||||||||||| || || ||||||| Sbjct 2594 TTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAAG 2653 Query 28485 GAGCCAATCCCGATGTCGG 28503 | || || || || |||| Sbjct 2654 GTGCTAACCCTGACCTCGG 2672 >seq20122 Length=23100 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | |||||||||| | || ||||| |||||||||||||| | Sbjct 10404 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAC 10463 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || |||||||| || | | || || | ||||||||| ||||| Sbjct 10464 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGAGGA 10523 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| |||||| ||||| | ||| | ||||| | | ||| || Sbjct 10524 ATCCCCTCCTTATC-TTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAAC 10582 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| || |||||||||||||| ||||| Sbjct 10583 TTCAAGAGTAATAGTTTTACCAGTAAGTGTTTTTACAAAAATTTGCAT 10630 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||||| |||||| || | | || ||||||||||| || ||||| | Sbjct 10632 CCACCTCTTAGACGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 10691 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || ||||| || | | | || || | ||||||||| ||||| Sbjct 10692 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCTGGAGGA 10751 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| |||||| |||| | ||| | || || | | ||||| Sbjct 10752 ATGCCCTCTTTATC-CTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 10810 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| |||||||| || ||||||||||| ||||| Sbjct 10811 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 10858 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | |||||| |||||||| | | |||||||| || || || ||||| | Sbjct 11088 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 11147 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || ||||| || || | | || || | ||||| || ||||| Sbjct 11148 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 11207 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | |||| |||| | ||| | ||||| | | ||||| Sbjct 11208 ATGCCTTCTTTGTC-CTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 11266 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| |||||||| ||||| |||||||| ||||| Sbjct 11267 TTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 11314 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | |||||| |||||||| | | |||||||| || || || ||||| | Sbjct 10860 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 10919 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || ||||| || || | | || || | ||||| || ||||| Sbjct 10920 AATGTGCGACCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGA 10979 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| |||| | ||||| | ||| | || || | | ||||| Sbjct 10980 ATACCTTCCTTGTCT-TGAATTTTAGCTTTAACATTTTCTATTGTATCAGAAGCTTCCAC 11038 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| |||||||| || ||||||||||| ||||| Sbjct 11039 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 11086 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | |||||||||| | || ||||| ||||| |||||||| | Sbjct 11316 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 11375 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || || || || | | | || || | |||||||| ||||| Sbjct 11376 AGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 11435 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| |||| | |||| | ||| | ||||| | | ||| || Sbjct 11436 ATTCCTTCCTTATCT-TGAATTTTGGCCTTAACATTTTCAATTGTGTCAGAGGGCTCAAC 11494 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || |||||||| ||||||||||| || ||||| Sbjct 11495 TTCCAGTGTGATAGTCTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 11542 >seq22953 Length=36863 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 ||||| || | ||||| |||||||||| | | || ||||||||||| || || || | | Sbjct 13999 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 14058 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || |||||||| || | | | || || | |||||| || || || Sbjct 14059 AAT-GTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGG 14117 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| ||| || | | ||| | ||||||| || || || Sbjct 14118 AATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTAC 14177 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||| || || ||||| || ||||| |||||||| Sbjct 14178 CTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 14225 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||||| |||| ||| | | | ||||||||||| ||||||||||| | Sbjct 13771 CCACCTCGCAGACGCAGTACTAGATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAC 13830 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||| ||||| | | |||| |||||||| || || || || Sbjct 13831 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 13890 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| |||||| ||| | | ||| | ||||| | | || || Sbjct 13891 ATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 13950 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| || ||||| ||||| || ||||| Sbjct 13951 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 13997 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||||| |||||||| | | ||||| ||||| ||||||||||| | Sbjct 13543 CCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 13602 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || ||||| || | | |||| ||||| ||||| || || || Sbjct 13603 AGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 13662 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| ||||| || ||| | || | |||| | ||| | |||||| | | |||||| Sbjct 13663 ATACCCTCTTTATC-TTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 13721 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || || || ||||| || ||||| Sbjct 13722 TTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 13769 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | |||||||| | | || || ||||| ||||| ||||| | Sbjct 12631 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 12690 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| | |||||||| | | |||| |||||||||||||| || || Sbjct 12691 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 12750 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | ||| | ||||| | | ||||||| Sbjct 12751 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCCACC 12810 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| ||||| || || || |||||||| Sbjct 12811 TCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 12857 >seq19342 Length=14378 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||||||||| || ||||| || || ||||||||||| | | Sbjct 4073 GATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCA 4132 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||| || ||||| || || |||||||| || || |||||| ||||| Sbjct 4133 AAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACA 4192 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | ||||||||||| || | |||||||| || || || || Sbjct 4193 TTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTG 4252 Query 138601 ACAAAAATCTGCAT 138614 || ||||| ||||| Sbjct 4253 ACGAAAATTTGCAT 4266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495244875981600