Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq22953 165 6e-36 seq19342 120 2e-22 seq20122 114 9e-21 >seq22953 Length=36863 Score = 165 bits (182), Expect = 6e-36 Identities = 170/221 (77%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || || ||||| ||||| |||||||| || || || ||| ||| | | ||||| Sbjct 14242 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAAAGAGTGCGTCCGTCT 14301 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 |||||||| || |||||| | |||||||| ||||| || ||||| ||||||||||| Sbjct 14302 TCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 14361 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||||| ||||||| |||| ||||||||| | ||| || || || ||||||||| Sbjct 14362 TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTT 14421 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185 ||||| || || ||||| ||||| || ||||| ||||| || Sbjct 14422 TTACCCGTAAGTGTTTTCACAAAGATCTGCAT-TTTGATAT 14461 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 ||||| || ||||| || ||||| || || |||||||| | | | | ||||||| Sbjct 13333 ACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCGTCTTCC 13392 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 |||||||| ||||| | || | |||||||||||| || || || ||||| || Sbjct 13393 AATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGT 13452 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| ||| ||| | || || || || |||||| || | ||||||||| || Sbjct 13453 ATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTT 13512 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| ||||| ||||| ||||||||| Sbjct 13513 CCAGTCAATGTTTTGACAAATATTTGCATA 13542 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||||| || ||||| || || ||||| || || | | | | ||||| Sbjct 13105 ACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCTTCC 13164 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || |||||| | || | ||| ||||| || |||||||||||||| || | Sbjct 13165 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 13224 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||| ||| |||| || || || || || || || || || ||||| Sbjct 13225 ATCTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTTTTT 13284 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| ||||| |||||||| Sbjct 13285 CCAGTAAGTGTTTTGACAAATATTTGCAT 13313 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||||| | | ||||||||||| ||||| |||||||| |||||||| || Sbjct 13543 CCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 13602 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||||| ||||||||||| | || | ||| ||||| || ||| Sbjct 13603 AGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 13662 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || || || ||| || |||||| |||| || || || || || Sbjct 13663 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACT 13722 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || ||||| || || || ||||| ||||||||| Sbjct 13723 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 13770 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||||||| | ||||| |||||||| ||||| || || ||| | | | || || Sbjct 12649 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCC 12708 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || ||||| ||||| | || | |||||||||||| ||||| || |||||||| Sbjct 12709 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 12768 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| |||| ||||| || || || || || || ||||| || Sbjct 12769 ATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCCACCTCCAAAGTGATGGTCTTC 12828 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || || |||||| Sbjct 12829 CCAGTAAGAGTCTTAACGAAGATCTGCATA 12858 >seq19342 Length=14378 Score = 120 bits (132), Expect = 2e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGC 15037 || || || ||||| |||||||| || || ||| || | ||||||| |||||| | Sbjct 4070 GTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTACGTCCATCTTCTAGTTGTTTAC 4127 Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097 |||| | |||||||| || ||||| |||||| |||||||| || ||||| || Sbjct 4128 CAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTT 4187 Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157 ||||| ||||||||||||| || || || | ||||||||||||||| || || | Sbjct 4188 TTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 4247 Query 15158 TTTTTACAAAAATTTGCAT 15176 | || || ||||||||||| Sbjct 4248 TCTTGACGAAAATTTGCAT 4266 >seq20122 Length=23100 Score = 114 bits (126), Expect = 9e-21 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | ||| | ||| | ||||||||||| ||||| || || || || || || Sbjct 10176 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTC--TG 10233 Query 15010 AGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| ||| ||||| | ||| || || || | |||| | ||||| || | Sbjct 10234 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCAAAAATCAGTCTTTGTTGATCTGGAG 10293 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||| ||||||||||| ||| ||||| || ||| |||| |||||||| | |||| Sbjct 10294 GAATGCCTTCCTTGTCTTGAATCTTTGC-CTTAACATTTTCGATAGTATCAGAAGCTTCT 10352 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| ||||| || |||| ||||| |||||||||||||| Sbjct 10353 ACTTCCAAAGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 10402 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 || |||||||| | ||||| || || || || || || || ||| ||| || | | Sbjct 10875 AAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGACCAT 10932 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| | ||| || |||||| | |||| | ||||| || ||||| |||||||||| Sbjct 10933 CTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTGT 10992 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | |||||| ||| ||| ||||||| ||||| | ||| || || || || || | Sbjct 10993 CTTGAATTTTAGCTTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAG 11052 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || ||||| || ||||||||||||||||| Sbjct 11053 TTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 11086 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | |||||||| | ||||| || || || |||||||| || || Sbjct 10404 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTC--TG 10461 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || | ||||| | |||||| |||||| | || | | ||||||||| | Sbjct 10462 ACAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGAG 10521 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || ||||| || |||||| ||| ||| |||| || || || | || | Sbjct 10522 GAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAA 10581 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||||| |||||||| || || |||||||||||||||||||| Sbjct 10582 CTTCAAGAGTAATAGTTTTACCAGTAAGTGTTTTTACAAAAATTTGCAT 10630 Score = 105 bits (116), Expect = 5e-18 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--T 15022 || |||||||| | ||||| || || || || || || || ||| ||| ||| | Sbjct 11103 AAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGCCCAT 11160 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| | ||| || |||||| | |||| | ||||| || ||||| ||||| |||| Sbjct 11161 CTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGT 11220 Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 | ||| ||||| || ||| |||| || || || | ||| || ||||||||||| Sbjct 11221 CCTGAATCTTTGCCTTA-ACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 11279 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| |||||||||||||| Sbjct 11280 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 11314 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 |||||| || | ||||| || ||||| || || || || ||| | | | ||||| Sbjct 10649 AACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTC 10708 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || ||||||||||| | |||| | ||||||||| ||||| || || || || Sbjct 10709 TAGCTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTATCCTG 10768 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| || ||| |||| || ||||| | ||| || || || || || ||||| Sbjct 10769 AATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTT 10828 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || ||||||||||||||||| Sbjct 10829 CCCAGTCAGTGTCTTTACAAAAATTTGCAT 10858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356677532068550