Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq20852 147 2e-30 seq22953 113 4e-20 seq20122 109 5e-19 >seq20852 Length=11699 Score = 147 bits (162), Expect = 2e-30 Identities = 400/601 (67%), Gaps = 20/601 (3%) Strand=Plus/Plus Query 22220 GTCGTCGCCGATACGGACGGTTCGCATTTGGCGCCTCTCGCGTACGACTATTTTGA--AA 22277 ||||| |||||||| || || ||||| | ||||| | || || ||| || || Sbjct 2077 GTCGTGGCCGATACCGATGGAAGTCATTTACCTCCTCTAGAATAT-AC-ATTGGGAGAAA 2134 Query 22278 ACAACAAGCGTTTCAAG-ACGCATCCTAATAAAATTGTCGCCGGCTATTTTGTCGAGTGG 22336 | || |||| |||||| | |||| | ||| |||| | | ||| || || || ||| Sbjct 2135 AAAATAAGCCGTTCAAGCAAACATCTGGA-AAAGTTGTGGGTGCCTACTTCGTAGAATGG 2193 Query 22337 GGAGTGTACCTTCGCCAGTTTCCCGCCGACAAGGTGCCCGTGCCGAACCTGTCGCATTTG 22396 || || || | | | | || |||| || | || | || || || | |||||| Sbjct 2194 GGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATACCTAATCTTACTCATTTG 2253 Query 22397 CTCTACGGTTTCGTGCCAATATGCGGCGGAGACGGCATCAACGACGCCCTGAAAACGGTG 22456 |||||||| || | ||||| |||||||| ||||||||||| || | ||| | | Sbjct 2254 CTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAATGATAGTTTAAAAGAGATC 2313 Query 22457 CCGGGAAGCTTCGAGGCGTTGCAACGGTCGTG---CGTCAATAGAGCCGATTTCAAGGTG 22513 || || ||| | || | || ||||| || || | | ||| || || || || Sbjct 2314 GAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGT-GAG--GACTTTAAAGTC 2370 Query 22514 ACCATACACGATCCGTGGGCGGCCGTACAAAAACCTCAAAAAGGCGTGTCGTCGTGGAAC 22573 | || |||||||| ||||| || |||||||||| |||||||| |||| || |||||| Sbjct 2371 TCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGAAC 2430 Query 22574 GAACCGTACAAAGGCAACTTTGGTCAATTGATGGCAGTGAAAAGAGCGAATCCTCATCTC 22633 || || ||||||||||||||||| ||||| ||| || | ||| ||| ||| | | Sbjct 2431 GAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAATTG 2490 Query 22634 AAAGTGTTAGCATCGATCGGCGGATGGACGTTGTCCGATCCGTTTTATCATATGCACGAC 22693 || | | |||| || || || |||||| | ||||||| || | | | ||| Sbjct 2491 AAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTTGAC 2550 Query 22694 AAGAACGTGAGACAA----ATTTTCATCGATTCGGTGGAAGAGTATTTGATCACGTGGAA 22749 | || | ||| || |||| | | || || | |||| | | || ||||| Sbjct 2551 A--AATCTAAGAGAACACGATTT--GTGCAGTCAGTAAAGGAGTTCCTTCTAACATGGAA 2606 Query 22750 GTTCTTTGACGGCGTCGATATTGATTGGGAGTTTCCCGGCGGCAAGGGGGCGAATCCTAA 22809 ||||| || || || ||||| ||||||||||| || || ||||| || || || ||| | Sbjct 2607 ATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAAGGTGCTAACCCTGA 2666 Query 22810 C 22810 | Sbjct 2667 C 2667 >seq22953 Length=36863 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||||| ||||| || | ||||| |||||||||||||| || ||| Sbjct 14226 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGA 14285 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| || |||| || ||||||||| | ||||| || || ||||| ||||| Sbjct 14286 AAGAGTGCGTCCGTCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 14345 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||| ||||||| | ||| ||| || || | | ||| | || || | | || | Sbjct 14346 AATGCCTTCCTTGT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 14404 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | || | ||||| || || || ||||| ||||| |||||||| Sbjct 14405 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 14453 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || ||||| | |||||||||||||| || ||||| || | Sbjct 13543 CCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 13602 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| ||||||||||| ||||| |||| | || || ||||| || || Sbjct 13603 AGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 13662 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| || || || || ||| | | ||| | |||||| | ||| ||| Sbjct 13663 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACT 13722 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || ||||| || ||||| Sbjct 13723 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 13769 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| || ||||||| ||||| || ||||||||||| ||||| | || || | Sbjct 14011 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 14070 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || || ||||||||||| | |||| | ||| ||||| || || || ||||| ||| Sbjct 14071 TCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 14130 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || ||| | | ||||| ||||| | || || || | || | Sbjct 14131 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCTAAAGTGATG 14190 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || ||||| || ||||| |||||||| Sbjct 14191 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 14225 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||| || || | || |||||||| |||||||||||||| Sbjct 13314 TCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGA 13373 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| || || | ||||||||||| | || | ||||| || || || || Sbjct 13374 CAAAGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGG 13433 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||| ||| ||||| |||| | || | ||||| | || || Sbjct 13434 GATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTAC 13493 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | || || || |||| ||||| ||||| || ||||| Sbjct 13494 TTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 13541 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || ||||| || || ||||| || | || |||||||| ||||||||||| || Sbjct 12859 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 12918 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || |||||| | || | || || ||||| || || Sbjct 12919 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 12978 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| ||||| ||| || || | | ||| | ||||| | || ||| Sbjct 12979 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 13038 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || ||||| || |||||||| |||||||| Sbjct 13039 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 13085 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | || ||||| ||||| || ||||| || | Sbjct 13771 CCACCTCGCAGACGCAGTACTAGATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAC 13830 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | || || ||||| |||| | ||||||||||| || || Sbjct 13831 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 13890 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||| ||||| |||||| || | | ||| | ||||| | | || ||| Sbjct 13891 ATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 13950 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || || ||||| ||||| || ||||| Sbjct 13951 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 13997 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | || ||||| | ||||| |||||||| || || || || | Sbjct 12631 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 12690 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | |||||| ||||| |||| | ||||| || || || || Sbjct 12691 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 12750 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| || ||| | | ||||| ||||| | ||| || Sbjct 12751 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCCACC 12810 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || ||||| || || || |||||||| Sbjct 12811 TCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 12857 >seq20122 Length=23100 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || ||||| || ||||| | |||||||| || || ||||| || || Sbjct 10859 TCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGA 10918 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| ||| || || || ||||||||| | |||| || || ||||| ||||| Sbjct 10919 CAATGTGCGACCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGG 10978 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGT-TGTTCGACGGTGTCCGTACTCTCGA 127064 || || |||||||| ||| ||| |||| | | ||| | || || | | || | Sbjct 10979 AATACCTTCCTTGTCT-TGAATTTTAGCTTTAACATTTTCTATTGTATCAGAAGCTTCCA 11037 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | || | ||||| || ||||| || ||||||||||| ||||| Sbjct 11038 CTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 11086 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | || |||| || || || | ||||| || ||||||||||| || || | Sbjct 10632 CCACCTCTTAGACGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 10691 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| ||||||||||| ||||| | |||| | ||| || || ||||| Sbjct 10692 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCTGGAGGA 10751 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 |||||||| || ||| ||| ||| || ||| | | ||| | || || | | || || Sbjct 10752 ATGCCCTCTTTATCC-TGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 10810 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || ||||| || ||||||||||| ||||| Sbjct 10811 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 10858 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||||| ||||| || || ||||| ||||| || || ||||| ||| || Sbjct 10422 ACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGACAGTGTGCGTCCATCTTCA 10481 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || |||||||||||| | || | | ||| || || ||||| || |||||||| | | || Sbjct 10482 AGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGAGGAATCCCCTCCTTAT-CTTG 10540 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| ||| || | | ||| | ||||| | | ||| ||||| | || | ||||| Sbjct 10541 AATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTT 10600 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || |||||||||||||| ||||| Sbjct 10601 ACCAGTAAGTGTTTTTACAAAAATTTGCAT 10630 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||||| ||||| || || ||||||||||| || || || || ||| || Sbjct 11334 ACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTACGTCCATCTTCA 11393 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| |||||||| | || | | || || || ||||| || || ||||| || Sbjct 11394 AGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGA 11453 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | ||| | ||||| | ||| ||||| | || | || ||| Sbjct 11454 ATTTTGGCCTTAACATTTTCAATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTG 11513 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||||||||| || ||||| Sbjct 11514 CCAGTCAGTGTTTTTACAAATATTTGCAT 11542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474525845047200