Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq20852 221 8e-53 seq22953 113 3e-20 seq20122 96.9 2e-15 >seq20852 Length=11699 Score = 221 bits (244), Expect = 8e-53 Identities = 848/1309 (65%), Gaps = 46/1309 (4%) Strand=Plus/Minus Query 5815 TATTGCCCAAACCGGTGTTCATTGCATTTAAAAGATCACCGTTGTCCGCGTCTATTTCCC 5874 |||| || | ||| ||||||| ||||| | || |||||||| || ||||| | ||||| Sbjct 3367 TATTACCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCC 3308 Query 5875 ACGCAAATAAACCACCCAAATTTTTGCTCACTACATACTTACCTTTTGCTACCACCGATT 5934 | ||||| | ||| || | || || | |||||| ||||| ||| | | || ||| Sbjct 3307 AAGCAAAGAGACCTCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACGGATC 3248 Query 5935 GATCGTTGTCGTACGTAACTAAATCATTATT--ATCGT----AGACGTACGGAGATTGTG 5988 | | || || || || || | ||| | | || || | ||||| || | ||| | Sbjct 3247 TAGCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAAACGTAGGGGGCTTGGG 3188 Query 5989 CAATGTTATCATA---GAATTGTACACTTTCGTCGTACCTATTTA-----CAATATCTTT 6040 | | || || || ||| | ||||| | | | | | |||| |||| || | Sbjct 3187 CGACATTGTCGTAATGGAACTCC-CACTTGCCTTG-AGCAATTTCATTCGCAATCTCCCT 3130 Query 6041 ATAATCGATTACGCCGCTTTCCCATGTACCTTTAACGGGAGCGCTAGCTATTCCTGTAAA 6100 || || | || ||| || ||| || ||||| || || | |||| | ||||| || Sbjct 3129 GTAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 3070 Query 6101 CGGATTATTGTTTTCG-ACTCGATGCACACCGCTCCAGCCGCGTCCATACATAGCCACAC 6159 ||| | |||| || | | || ||| || || |||| || || ||||||||||| |||| Sbjct 3069 GGGAATGTTGTCTTTGTAATC-ATGAACGCCAGTCCAACCACGACCATACATAGCAACAC 3011 Query 6160 CTACTACTAATTTAGTCGAATCGACATTTTGATTTAACAA-TCTGTTAATAGCAAAATGG 6218 ||||||| | || | | || || || | ||| | | ||| | | || | Sbjct 3010 CTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTC-CGAAGTCA 2952 Query 6219 GTTGTGTAATTTTCGTTAACGTCCCACGAAGGAGCGTAAAGCGGTGTTTGAAAACCCAAA 6278 | ||||||| |||| || | ||||| ||| ||||| | || |||||| || | | Sbjct 2951 GATGTGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGA 2892 Query 6279 TTTTCCATGGACCAAGCGCCTTTAAAATCGTAGGTCATTACAAATATATAATCGAGATAG 6338 | || | ||||| || || || || ||||| |||| | || |||| ||| | ||| Sbjct 2891 GTATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAA 2832 Query 6339 CGTTGCGCGTCTGTATAATCGACAACGTCGATTTTGTCGTAACCGGCACCGATAGCGCTA 6398 ||| || | || || ||||| | |||||| || | || || | ||||| | Sbjct 2831 TTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAA 2772 Query 6399 GTTAGTTGCAATCGTTTACCTCTCtttttttCCAATTTGTTGAGCATTTCGCGTAACTCC 6458 |||| || || ||||| |||| | | | | |||||| || ||||| || Sbjct 2771 GTTAATTCGTATTTCTTACCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCT 2712 Query 6459 TTTAAAAGTATTGTATATGTTTTGCGATCCACTGAAGCGTTGCCCAGCGACGGGTTGGCA 6518 || | | || ||| | | ||| ||| | | || || ||||| ||| Sbjct 2711 TTCATCAAACTTACATAACAATCACCATCTTCTGG---GCTACCGAGGTCAGGGTTAGCA 2655 Query 6519 CCTTTACCGCCCGGAAACTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCACGTTTCC 6578 ||||| || || || ||||||||||| || || || || ||||| |||||||| ||| Sbjct 2654 CCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGA 2595 Query 6579 AAAAATTCGCGCACACTATCAACAAA-CGTATTTCGTTTTTCGAC--GTCGTTTAACTGG 6635 | || || || | ||||| ||| || | || || ||| ||| | Sbjct 2594 AGGAACTCCTTTACTGACTGCACAAATCGTGTTC---TCTTAGATTTGTCAACTAAAAAG 2538 Query 6636 TAAAACGGATCGCTAAGCGTCCATCCGCCTATCGATGGCAATATTGTTAAATCTGGATTG 6695 | || |||||| ||||||||| || || || ||||| | || | || || || | Sbjct 2537 AAGAAAGGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGG---G 2481 Query 6696 TGGCGCTTGATC----GCCATTAACTGTCCAAAGTTTCCTTTGTACGGTTCGTTGTAGGC 6751 || ||||| | | |||||| || |||||||| |||||||| || ||||| | | Sbjct 2480 CGG-GCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGA 2422 Query 6752 CTCGACA--CCTTTTTGTGGTTTTTGAAGCGCTCCCCATATATCATGAATGGTTACTTTG 6809 |||| ||||||||||||||||| | ||| ||||| ||| || || | ||||| Sbjct 2421 A--GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTA 2364 Query 6810 AAATCTTTTCGGCCGGCGCACGATTTTTGCAACGCCTC-AAACGAACTGGGTATTTGTTG 6868 || || | |||||| || || || | || | |||| || | || | || Sbjct 2363 AAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCG-ATCTCTT- 2306 Query 6869 TTTAAGCGCATCGTTTACACCATCGCCGCCACAAATTGGTATAAACCCGTACAACAAATG 6928 |||| | ||| || | || || ||||| |||||||| ||||| ||||| | |||||| Sbjct 2305 -TTAAACT-ATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATG 2248 Query 6929 TGTAAGATTAGGAATGGGAATTTTGTCGGCGGGATATTGTCTATCGTAAACACCCCATTC 6988 ||||||||||| || || || || |||| ||| ||| || ||||||||||| Sbjct 2247 AGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTC 2188 Query 6989 CACAAAGTAAGCGCCCACAACATTATCGGTAATTTTTTCGAACGGTACATTGTTTTCCGA 7048 || ||||| || |||||||| || | | ||| | |||||| ||| ||||| Sbjct 2187 TACGAAGTAGGCACCCACAACTTTTCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCC 2128 Query 7049 CCACATATATTTTATAGGATTTAAATGCGAACCGTCTGTATCGGCCACG 7097 | | |||||| || |||| |||||| || || |||||||||||| Sbjct 2127 CAATGTATATTCTAGAGGAGGTAAATGACTTCCATCGGTATCGGCCACG 2079 >seq22953 Length=36863 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||||| |||||| || | ||| ||||||||| |||||||| |||| Sbjct 14227 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAA 14286 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | |||| | || || ||||| || || | ||||| ||||| || ||||| | || Sbjct 14287 AGAGTGCGTCCGTCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 14346 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||| ||||| ||||| ||| | | | | || || | ||| || Sbjct 14347 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 14406 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||||||||| ||||||||||| | ||||| || ||||||||||| Sbjct 14407 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 14453 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| ||||| ||||||||||| ||||||||| || ||||| || | | Sbjct 12631 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 12690 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| ||||| ||||| || |||| || | |||||| || || | ||| Sbjct 12691 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 12750 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTA--ATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | ||| || ||||| || || ||| || ||| || ||||| | |||| Sbjct 12751 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATA--GTGTCAGATGGCTCCA 12808 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||||||| || || || || || | ||| || |||||||||||||| Sbjct 12809 CCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 12857 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||||| ||||||||| | ||| | || || ||||| || || || || | | Sbjct 13771 CCACCTCGCAGACGCAGTACTAGATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCAGAC 13830 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| |||| |||||||| || || |||| || | |||||||||||| | || Sbjct 13831 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 13890 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||| |||||||| ||||| ||| | | | | |||||| | ||| || Sbjct 13891 ATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 13950 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || |||||||||||||| || || | ||||| || ||||| ||||| Sbjct 13951 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 13997 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| ||||| | |||||| ||||||||| ||||| || ||||| || || | Sbjct 12859 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 12918 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | || |||| |||| || || || | ||||| | ||| || ||||| | ||| Sbjct 12919 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 12978 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || |||||||| || || ||||| | | | ||||||| | ||| || Sbjct 12979 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 13038 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || || ||||| || || | || ||||| ||||||||||| Sbjct 13039 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 13085 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| || || || |||| || ||||| || ||||| ||||| | | Sbjct 13315 CCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGAC 13374 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| ||| | || ||||||||||| || ||||||| | |||||| || || | ||| Sbjct 13375 AAAGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGG 13434 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||| || || || |||||| ||| | || | | |||||| | ||| || Sbjct 13435 ATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACT 13494 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| ||||| || || || || || ||||| || || || ||||| Sbjct 13495 TCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 13541 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 ||||| || | |||| ||| ||||| | || ||| ||||| ||||||||||| | Sbjct 13999 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 14058 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || || |||| |||| |||||| || ||||||| | | ||| ||||| | ||| Sbjct 14059 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGA 14118 Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | || |||||||| | || ||| | || ||| || ||||| | ||| | Sbjct 14119 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATA--GTGTCGGACGGTTCTA 14176 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || ||||| || ||||| || || | ||| || || ||||||||||| Sbjct 14177 CCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 14225 >seq20122 Length=23100 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||||| || || |||||||| ||| || || |||||||| || | | Sbjct 11772 CCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 11831 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| |||| |||| ||| || ||| | ||||| | | || ||||| | || Sbjct 11832 AGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 11891 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||| ||||| || ||| || | | | | ||| || | |||||| Sbjct 11892 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 11951 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||||| || || ||||| || |||||||||||||||||||| |||||| Sbjct 11952 TCCAATGTGATAGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 11999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346675168004990