Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5945 116 5e-21 >seq5945 Length=4136 Score = 116 bits (128), Expect = 5e-21 Identities = 895/1434 (62%), Gaps = 51/1434 (4%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| || || ||||| | ||| | ||| | || || || ||||| ||||| |||||| Sbjct 3053 GAAAGGCCTCAACACATGCTTATGAGAGTCTCCATAGGCATTCATGGTGAAGACATTGAT 2994 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724 || | | || || | | |||||| | ||| || | || |||| || || Sbjct 2993 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 2935 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 || ||| ||| | ||||| | || || | ||| ||||||||||| || | || Sbjct 2934 ACTGTTCTCCGCAGCCACACCGCGGCCACAGCTTTCCTCCTGTTTCCTTATAGCTATGAA 2875 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 || ||| || | || |||| | ||| | | ||||||| ||| || || | Sbjct 2874 AGACGATAGCATTGAAGGTATTTTTGATACTTTAAAACAATGTGCATTAATTTCTAAATC 2815 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902 |||||||| || || | || | ||| ||||||| || | || || ||| Sbjct 2814 TGCTGGTGGCATAGGTTTACATACACATTGCATCAGAGCT--CAGGGTTCTTACATAGCT 2757 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || ||||| ||| ||||| | | |||||| | | || | |||| || || Sbjct 2756 GGCACTAATGGGGTCTCAAATGGTCTAGTGCCAATGTTGAGAGTGTATAACAATACTGCC 2697 Query 111963 CGCTATGTAAACCAAGCTGGG------CGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 | |||||| | |||| ||| |||| | | || | ||| | ||| | ||| Sbjct 2696 AGATATGTAGATCAAGGTGGAAACAAACGTCCCGGCGCATTT---GCAATTTATTTAGAG 2640 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || ||||| ||||| || | || ||| | || || ||| |||| | || || Sbjct 2639 CCTTGGCATGCGGACATATTTGAATTCTTGGATTTAAAGAAGAACACAGGTAAGGAAGAA 2580 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | | | || || || | ||| | ||||| |||||||| || ||||| ||||| Sbjct 2579 ATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGAGTA 2520 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 || || || |||| |||| | ||||| | | || || ||| | || | Sbjct 2519 GAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATGACTGTCCTGGCCTCGCTGACTGC 2460 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 | || ||||| ||||||| || || || || || || ||||||| || | | Sbjct 2459 TTTGGAGAGGAATTTGAAGAACTATATACCAAATATGAAGAAGAAAAACGATTTA-TAAA 2401 Query 112257 ACG-GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || || |||| || | ||||| | ||| | | | ||| ||||||||||| Sbjct 2400 ACAAGTCAGAGCTCAAGAGTTATGGAAGTCGATTATAGAAGCCCAAGTGGAGACTGGTAC 2341 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 |||||| ||| | || || || || |||||| ||||||||||||||| ||| | || Sbjct 2340 ACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCAC 2281 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 || || || ||| || || || || | || ||| || ||||||| ||| Sbjct 2280 TATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGC 2221 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 112495 ||||| ||||| || || || || || || || ||| || | || | ||| Sbjct 2220 AGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT------TGAAAATAACAGATT 2167 Query 112496 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 | ||| | ||||| | | ||| | || || | ||| || |||| |||||| |||||| Sbjct 2166 TAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTAT 2107 Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||| |||||||| || || ||| || | || ||||||||||| | || Sbjct 2106 TGATGTTAATTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAGACATAGACC 2050 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 112672 |||||| | ||||| || || | || |||| || | ||| | | || | Sbjct 2049 TATTGGTATTGGTGTTCAGGGCATGGCAGATGCGTT-----TGTGTTGATGAGAATAT-C 1996 Query 112673 TTCCGACGAAGCGAAGGAAA------TCAATGCGCGTATATTTGAGACAATGTATCACGC 112726 || ||| | ||| | || ||||| | |||||||| ||||| ||| | | Sbjct 1995 TTACGAAAGTGAGAAAGCAATACTTCTCAATCAACAAATATTTGAAACAATTTATTATGG 1936 Query 112727 CGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786 || | || || |||| || || || || || ||| |||| || | | | || Sbjct 1935 TGCATTAGAAGCTAGTTGTGAATTAGCTGAAAAAGAAGGTGCATACAGCACATATCAAGG 1876 Query 112787 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG---AAGGTGAGACCAAGCT 112843 |||||| ||||| | || || | ||||||||||| || | || | || Sbjct 1875 GAGTCCAGCAAGCCAAGGTATCCTCCAGTATGATATGTGGGACAAAACTCCTACAGACCT 1816 Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGT 112901 | | ||||||| | || || ||| || ||| | | ||| | || || | Sbjct 1815 T---TGGGACTGGGCTGTCCTTAAAGAAAAGATAGCAA--AACATGGTTTGCGCAATTCT 1761 Query 112902 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 112961 || ||||| || || ||||| || ||||| || |||||||| | || || | ||||| Sbjct 1760 CTATTGATAGCTCCTATGCCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCT 1701 Query 112962 TTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 113015 |||||||||| || | || || || | |||||| | | | ||||| ||| Sbjct 1700 TTTGAACCCTTTACATCAAATATTTACCAAAGAAGAGTCTTATCTGGAGAATTT 1647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619469645301600