Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq20852 251 6e-62 seq22953 107 2e-18 seq20122 95.1 1e-14 >seq20852 Length=11699 Score = 251 bits (278), Expect = 6e-62 Identities = 835/1285 (65%), Gaps = 30/1285 (2%) Strand=Plus/Minus Query 105818 TGTTCATGGCATTGAGTAAATCGCCGTTATCGGCATCTATTTCCCAAGCAAACAAACCGC 105877 ||||||||||||| |||| || |||||||| || || | |||||||||||| | ||| | Sbjct 3352 TGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCAAAGAGACCTC 3293 Query 105878 CCAGTTTGTTTCGATCGACATATTTAACCTTGCCCAAAACAGAATCGA-CGCTATCAAAC 105936 | || ||||| ||||||||| |||| | | ||| || || | | ||||| | Sbjct 3292 CTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACGGA-TCTAGCATTATCATAG 3234 Query 105937 GAAATTAAATCCNNNNNNNNNNNNNCAAAAACGTACGAAGCTTGAGCGACATTGTCAAAC 105996 | | | ||| |||||||| | ||||| ||||||||||| | Sbjct 3233 GTTACAAGATCTCCAGTTGATGGTCTGAAAACGTAGGGGGCTTGGGCGACATTGTCGTAA 3174 Query 105997 GTGTACACGTACGTG--TTCAG---TTTTGTTTG-AATCTGTCGGTAATCTACGACGCCG 106050 | || | || || || || ||| || | ||||| | ||| || || || ||| Sbjct 3173 TGGAACTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCCCTGTAGTCAACCACTCCG 3114 Query 106051 TCCTCCCAAGTGCCC--GACACGGGCCCGTTGCCGATTCCCGAAAAATAGTTGTTGCCAG 106108 || | |||||| || |||| || || || || | | || | || ||||| | Sbjct 3113 TCTTGCCAAGTTCCTTTGACA-GGTCCAGTAGC-GTTGCCTGTGAAGGGAATGTTGTCTT 3056 Query 106109 TATAATTGGTCACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTATTTTGT 106168 | |||| ||||| ||||| || || || ||||| ||||| ||||| | || || | Sbjct 3055 TGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTACTACAATCTTCT 2996 Query 106169 TGGGATCGACGTCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATTTTTCTT 106228 | |||| || | || |||||| | || || | | | |||||| |||| | Sbjct 2995 TAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTCCT 2936 Query 106229 CGGAATTCCAACTAGGCGCATATACCGTCGTTTGATAGCCCAGATCTGTGTTCGACCACG 106288 || |||||| |||||| || | | |||||||| || ||| || ||||| | Sbjct 2935 TGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGTATCATTTGACCAGG 2876 Query 106289 CCCCTTTAAAATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCGTCGTTAT 106348 | || || || ||||||||||| | |||||| | |||| ||| ||||| || | | | Sbjct 2875 CTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCGT 2816 Query 106349 AGTTTACCACGGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCGTAGAATT 106408 ||| || || ||||| || | || ||||| ||||| ||||||||||| | Sbjct 2815 AGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATTCGTATTTCT 2756 Query 106409 TGCCCGTTTGCAGTTCTAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAGCACGACAT 106468 | || | | | | || || ||||| | || || |||| || || |||| Sbjct 2755 TACCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACAT 2696 Query 106469 ATGTTTCGGCGTCGCGTTCCGCATCGCCCAAAGAAGGATTGGCCCCTTTGCCGCCTGGAA 106528 | || | || ||| | || | ||| || || |||||||| || || | Sbjct 2695 AACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTGCCACCAGGGA 2639 Query 106529 ATTCCCAATCTATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTCCTTTACAG 106588 | |||||||| ||||| || ||||| || |||||||| | | | || |||||||| | Sbjct 2638 ACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGGAACTCCTTTACTG 2579 Query 106589 AATTTACAAACACGT-TTCTTTTTTCAACGTCATGCATAAAATAGAAGGGGTCTGATAGC 106647 | | ||||| ||| |||| || |||| | ||| |||| || || | ||| Sbjct 2578 ACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGC 2520 Query 106648 GTCCAACCGCCTATAGACGGAAGCACTTTTAAAT----GCGGATTTGCCAATTTAGCCGC 106703 ||||| || || ||||| ||||| | || || | |||| ||| ||||| | Sbjct 2519 GTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGCTTGT---TTTAGT-GA 2464 Query 106704 CATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTGCGG 106763 ||| || || |||||||| || ||||| ||||||||||| | |||| |||||||| || Sbjct 2463 CATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTGG 2404 Query 106764 CTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTTGCA 106823 || |||| || ||||| |||||||| || || |||||||| || | || || | || Sbjct 2403 TTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCACGGCCGCTACA 2344 Query 106824 TGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCCATC 106883 || || | | || ||||| || || |||||| ||| || || || || Sbjct 2343 GGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGATGCCGTC 2284 Query 106884 ACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGACTTT 106943 ||||||||| || |||||||| ||||| | ||||| | | ||| || | || | Sbjct 2283 ACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAGGTATACG 2224 Query 106944 ATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACAGTTTT 107003 ||| ||||| || || | ||| || |||||||| || || || || | ||| ||| Sbjct 2223 ATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCACCCACAACTTT 2164 Query 107004 GTCC---TCTCT-CCTGCCGGGCTCGTTGTTTTCCAGCCATGTGTACTCGAGCGGAGCTA 107059 ||| | | | | || |||| || ||||| | |||| || || || |||| || Sbjct 2163 -TCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCCCAATGTATATTCTAGAGGAGGTA 2105 Query 107060 GATGGCCGCCGTCGGTGTTTGCCAC 107084 ||| | || ||||| | ||||| Sbjct 2104 AATGACTTCCATCGGTATCGGCCAC 2080 >seq22953 Length=36863 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| |||||||| || || || ||||||||| ||| ||||| || Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || |||| ||||| || || ||||| | ||| ||| ||| Sbjct 13481 GACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 13422 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | || || ||||| || |||||||||||||| | ||| || | ||||| || Sbjct 13421 CAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAAT 13362 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| ||||| || || |||||| Sbjct 13361 ATTCAGAAAGAGTCAACCCTGCAC 13338 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || ||||| |||||| | ||||||||||||||||| ||| |||||| Sbjct 14456 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 14397 Query 28611 TCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || || || | | || | || || |||| || ||||| || || | || ||| Sbjct 14396 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 14338 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 |||||| | | || || || || || ||||| ||||| ||| | |||| || Sbjct 14337 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTA 14278 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||| |||||||||||||||||||| ||| ||||||| Sbjct 14277 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 14242 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||| || || | || || |||||||| || || ||||| || Sbjct 14226 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 14167 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||| ||| ||||||||||| | ||| |||||| Sbjct 14166 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 14107 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 |||||| || || ||||| || |||||| |||||||| | | | ||| | |||||| Sbjct 14106 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTAT--CTGATTAT 14049 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || |||||||| |||||||| || || | ||||| Sbjct 14048 AATATTCAAAAGGAATCTACCCTACATTTAGTATT 14014 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || |||||||| ||| | || || ||||| || || ||| ||||| ||| Sbjct 13085 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 13026 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || || ||| ||||||||||| | ||| ||||||| Sbjct 13025 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 12966 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || || || || ||||| || |||| ||| ||| | | || || || Sbjct 12965 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 12906 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| ||||| || ||| ||||| |||||||| | ||||||||||| || Sbjct 12905 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGGTAT 12856 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||| |||| || || || || || ||| ||| || || Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGAGCCATCT 13710 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || || |||||||| | ||| ||||||| Sbjct 13709 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 13650 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||||||||| |||||||| | |||||| | || || | || || ||| Sbjct 13649 CAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 13590 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || |||||||| |||||||| || Sbjct 13589 ATCCAAAAAGAGTCTACTCTTCA 13567 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| |||||| | || || ||||| ||||| ||| ||| |||| Sbjct 13997 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 13938 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || |||||| ||||||||||| | || ||||| Sbjct 13937 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 13878 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | ||||||||||| || || |||||||||||| | || || | || || ||| Sbjct 13877 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 13818 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || ||||| || || || || || Sbjct 13817 ATCCAAAAGGAGTCGACCCTTCA 13795 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 ||||| ||||| | ||| ||| |||||| | || |||||||| || ||||| ||||| Sbjct 12764 GACAAGGAGGGCATTCCCCCAGACCAACAGCGTCTCATCTTTGCTGGTAAACAGTTGGAG 12705 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756 ||| ||| || | || |||||||| ||||||||||||||| |||| Sbjct 12704 GATGGCCGCACTCTGTCGGACTATAACATCCAAAAAGAATCTACTTTGCA 12655 >seq20122 Length=23100 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || ||||| ||| | || || || || || || ||| || ||||| Sbjct 11771 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 11712 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || | || || |||| || || ||||||||| | ||| ||||| Sbjct 11711 TGATACAATTGAAAATGTTAAAGCGAAAATTCAG-GATAAAGAGGGAATTCCCCCAGATC 11653 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTA 28729 | || |||||||| ||||| || || || | |||||| | | ||||| | ||||| Sbjct 11652 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTA 11595 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 |||||||| |||||||||||| ||||| | ||| || Sbjct 11594 CAACATTCAGAAAGAATCTACTTTGCACCTAGTACTA 11558 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| |||||||||||| | || |||||||| ||||| ||| || ||||| Sbjct 10630 ATGCAAATTTTTGTAAAAACACTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 10571 Query 28614 GAGACGGTGGCCGAT-CTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||||||||| || || || ||||| | || ||| || Sbjct 10570 GACACAATTGAAAATGTTAAAGCAAAAATTC-AAGATAAGGAGGGGATTCCTCCAGACCA 10512 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 |||||| ||||| || || || |||||| | |||||| || || | || || || Sbjct 10511 ACAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAA 10452 Query 28733 CATTCAAAAAGAATCTACT 28751 |||||| || ||||||||| Sbjct 10451 CATTCAGAAGGAATCTACT 10433 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| |||||||| || || ||||| ||||| ||| ||| |||| Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||| || ||||| || || | || ||||||| Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 10283 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||||| || ||||| || || ||| |||||||| || || | || ||||| Sbjct 10282 CAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 10223 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || || ||||||||||| || ||| | || | ||| | |||| || Sbjct 10222 ATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGG 10176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424554366617370