Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5945 181 5e-41 >seq5945 Length=4136 Score = 181 bits (200), Expect = 5e-41 Identities = 272/384 (71%), Gaps = 2/384 (1%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 || ||| | | |||||| | |||||| ||||| | |||||||| | ||||| |||||| Sbjct 2518 TCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTC 2577 Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 |||||||| || || ||| ||||| |||| ||| ||||| ||||| || || | ||||| Sbjct 2578 ATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCA 2636 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 || |||||||| || ||||| || | ||| ||||||||||||||| ||||| Sbjct 2637 AGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCT 2696 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT 26160 ||||| | || | ||| |||||||||| |||| ||| |||| | || || |||| Sbjct 2697 GGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCC 2756 Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220 | || | || || | ||| || || | ||| | ||| || |||||||| | Sbjct 2757 AGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGA 2816 Query 26221 TTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTT 26280 ||| ||||| |||||| | | | ||||| ||||| |||| |||||||| |||| Sbjct 2817 TTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTT 2876 Query 26281 CATTCCTAATAAAAAACAAGAAGA 26304 ||| ||| | ||||| || || Sbjct 2877 CATAGCTATAAGGAAACAGGAGGA 2900 Score = 113 bits (124), Expect = 2e-20 Identities = 350/529 (66%), Gaps = 16/529 (3%) Strand=Plus/Plus Query 24645 CGATATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAA 24701 || |||||| |||| |||| ||||| || |||| | |||||||||| || | ||| Sbjct 1275 CGTTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAA 1334 Query 24702 GATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTT 24761 | || |||||||| ||||| || | | |||||| ||| ||||| || || || |||| Sbjct 1335 G-TAGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTT 1393 Query 24762 TTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTT 24821 || || ||| | | | | | | ||| | |||||| |||| | |||| | Sbjct 1394 TTCCATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTC 1453 Query 24822 GTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATC 24881 |||||| || || | | ||| ||||| | || || || | | |||||||| Sbjct 1454 CTCTATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACA 1513 Query 24882 TCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AA 24939 ||| |||| || | ||||| || |||| | ||| | |||||||| || | | || Sbjct 1514 AATCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAA 1573 Query 24940 TA-GATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAG 24997 || | || | |||||| ||| | || | |||| ||| | | | Sbjct 1574 TAAGGTT---TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAA-ATCAGTCAGAAGA 1629 Query 24998 TGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAG 25055 || | || | | | |||||||||||| || |||||||| ||| ||| ||||| | Sbjct 1630 TGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATG 1687 Query 25056 TGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTA 25115 | || ||||||||| ||||| | || || | ||||| | |||||| || || ||||| Sbjct 1688 TAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAG 1747 Query 25116 ATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164 ||||| ||||| ||||| | |||||||| ||| | |||| || ||| Sbjct 1748 GAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTT 1796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252534143782250